Top 10 genes with highest correlation to Rv2982c/gpdA2:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2313c/- | (cc=0.6103) | info on Rv2313c/- |
| Rv1148c/- | (cc=0.5292) | info on Rv1148c/- |
| Rv0843/- | (cc=0.5036) | info on Rv0843/- |
| Rv0570/nrdZ | (cc=0.5022) | info on Rv0570/nrdZ |
| Rv3566c/nat | (cc=0.4963) | info on Rv3566c/nat |
| Rv3329/- | (cc=0.4937) | info on Rv3329/- |
| Rv1125/- | (cc=0.4704) | info on Rv1125/- |
| Rv3086/adhD | (cc=0.4536) | info on Rv3086/adhD |
| Rv1429/- | (cc=0.4286) | info on Rv1429/- |
| Rv0906/- | (cc=0.4285) | info on Rv0906/- |
Correlation of Rv2982c/gpdA2 with Rv3329/-
Normalized LFCs for Rv2982c/gpdA2:
(description and provenance of datasets)
| Rv2982c/gpdA2 | Rv3329/- | |
| Fe_supp_jason_reseq | -0.062 | 0.0 |
| low_pH_jason_reseq | 0.445 | 0.33 |
| NO_jason_reseq | 1.05 | 0.257 |
| B6_jason_reseq | 1.755 | 0.714 |
| MHCII_jason_reseq | 1.324 | 0.049 |
| Isoniazid02 | -2.513 | -2.423 |
| Rifampicin4 | 0.211 | 0.598 |
| Ethambutol3 | -2.309 | -1.639 |
| Meropenem3 | -2.13 | -2.211 |
| Vancomycin16 | -1.263 | -0.947 |
| Rv2680_day32 | 1.046 | -0.046 |
| H37Rv_KO_MarP | 0.73 | -0.354 |
| hypoxia_3wks | -0.375 | 0.323 |
| hypoxia_6wks | 0.34 | 0.418 |
| glycerol | 0.022 | 0.294 |
| cholesterol | 0.138 | 0.128 |
| AJ | 0.284 | 0.576 |
| Bibs02 | -0.408 | 0.114 |
| Bibs02c | -0.047 | -0.471 |
| BL6 | 0.161 | -0.095 |
| BL6a | -0.535 | -0.357 |
| BXD01 | -0.561 | 0.024 |
| BXD010 | -0.771 | -0.183 |
| BXD011 | -0.593 | -0.136 |
| BXD03 | -0.143 | 0.412 |
| BXD04 | -0.264 | -0.07 |
| BXD05 | -0.263 | 0.47 |
| BXD06 | -0.426 | -0.013 |
| BXD07 | 0.16 | 0.197 |
| BXD08 | -0.04 | 0.321 |
| BXD09 | -0.5 | -0.079 |
| CAST | 0.472 | 0.28 |
| CCcont | -0.704 | -0.159 |
| DS01 | -0.026 | 0.137 |
| DS02 | -0.359 | 0.444 |
| DS04 | 0.607 | 0.035 |
| DS0c | -0.057 | 0.079 |
| GP01 | -0.958 | 0.022 |
| GP02 | -0.576 | -0.011 |
| GP0c | -0.56 | -0.716 |
| NOD | 0.106 | -0.063 |
| NZO | 0.348 | 0.656 |
| PWK | 0.45 | 0.459 |
| H37Rv_KO_CtpC | -0.289 | -0.471 |
| H37Rv_KO_CtpD | -0.849 | -0.278 |
| H37Rv_KO_Rv1272 | -0.227 | -0.856 |
| H37Rv_KO_SugABC | -0.714 | -0.375 |
| H37Rv_KO_MbtN | -0.662 | -0.939 |
| Trans05 | -0.127 | -0.265 |
| macrophage_unactivated | -0.376 | -0.281 |
| IL1 | 0.077 | 0.098 |
| Rapamycin | 0.559 | 0.199 |
| Tcell | 0.332 | -0.042 |
| GMCSF | 0.499 | 0.069 |
| IFNab | 0.106 | -0.375 |
| IFNg | 0.588 | 0.088 |
| IFNg_GMCSF1 | 1.433 | 0.041 |
| Rv1432_day32 | -0.52 | -0.288 |
| Rv1565c_day32 | -0.106 | 0.627 |
| secA2_input | -0.643 | 0.343 |
| delta_Rv3594 | 0.623 | -0.314 |
| delta_Rv3717 | 0.361 | -0.258 |
| delta_Rv3811 | 0.706 | -0.421 |
| delta_Rv0954 | 0.424 | 0.094 |
| PonA1 | 0.22 | 0.264 |
| EccD1_KO | 0.799 | -0.428 |
| EspI_KO | 0.485 | 0.1 |
| PE35_KO | 0.152 | -0.7 |
| PPE68_KO | 0.166 | -0.115 |
| glycerol2 | 5.036 | 0.113 |
| lignocerate | -0.293 | 0.244 |
| oleate | -0.537 | 0.658 |
| phosphatidylcholine | -0.161 | 0.314 |
| acetate | -0.63 | -0.07 |
| glucAc | 0.31 | -0.458 |
| Rv0950ko | -0.292 | 0.054 |
| Rv1096ko | 1.053 | 0.262 |
| Rv3684ko | 0.606 | -0.118 |
| delta_otsA_trehalose | -0.567 | 0.232 |