Top 10 genes with highest correlation to Rv2976c/ung:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1975/- | (cc=0.4787) | info on Rv1975/- |
| Rv1414/- | (cc=0.4786) | info on Rv1414/- |
| Rv1855c/- | (cc=0.4523) | info on Rv1855c/- |
| Rv2800/- | (cc=0.4519) | info on Rv2800/- |
| Rv2228c/- | (cc=0.4413) | info on Rv2228c/- |
| Rv2840c/- | (cc=0.4371) | info on Rv2840c/- |
| Rv1060/- | (cc=0.4334) | info on Rv1060/- |
| Rv2704/- | (cc=0.4081) | info on Rv2704/- |
| Rv2302/- | (cc=0.4013) | info on Rv2302/- |
| Rv3306c/amiB1 | (cc=0.3972) | info on Rv3306c/amiB1 |
Correlation of Rv2976c/ung with Rv2228c/-
Normalized LFCs for Rv2976c/ung:
(description and provenance of datasets)
| Rv2976c/ung | Rv2228c/- | |
| Fe_supp_jason_reseq | -0.213 | 0.268 |
| low_pH_jason_reseq | -0.149 | -1.134 |
| NO_jason_reseq | -0.173 | 0.0 |
| B6_jason_reseq | -0.437 | 1.206 |
| MHCII_jason_reseq | 0.633 | 0.315 |
| Isoniazid02 | -0.06 | -0.49 |
| Rifampicin4 | 0.417 | -0.523 |
| Ethambutol3 | 1.3 | -0.153 |
| Meropenem3 | 0.117 | 0.138 |
| Vancomycin16 | 0.31 | -0.512 |
| Rv2680_day32 | -1.669 | 0.0 |
| H37Rv_KO_MarP | -0.47 | -1.065 |
| hypoxia_3wks | 1.603 | -0.427 |
| hypoxia_6wks | 0.48 | -0.223 |
| glycerol | 1.442 | 2.07 |
| cholesterol | -0.415 | 0.159 |
| AJ | -0.309 | 0.0 |
| Bibs02 | 0.898 | -0.109 |
| Bibs02c | 0.735 | -0.887 |
| BL6 | -1.761 | -0.074 |
| BL6a | 0.867 | -0.377 |
| BXD01 | 1.158 | 0.552 |
| BXD010 | 0.33 | 0.206 |
| BXD011 | -0.4 | -0.335 |
| BXD03 | 1.626 | 0.0 |
| BXD04 | 0.236 | 0.932 |
| BXD05 | 0.391 | -0.256 |
| BXD06 | 0.408 | 0.513 |
| BXD07 | 0.944 | 0.0 |
| BXD08 | 0.0 | -0.35 |
| BXD09 | 0.88 | 0.596 |
| CAST | 0.594 | -0.284 |
| CCcont | -0.601 | 0.898 |
| DS01 | 2.034 | 1.641 |
| DS02 | 1.793 | 1.638 |
| DS04 | 0.468 | -0.115 |
| DS0c | 1.383 | 1.867 |
| GP01 | 0.912 | -0.607 |
| GP02 | 1.42 | -0.353 |
| GP0c | 0.622 | -0.16 |
| NOD | 1.764 | 0.127 |
| NZO | -1.618 | 0.994 |
| PWK | 0.269 | 0.412 |
| H37Rv_KO_CtpC | -1.935 | 0.0 |
| H37Rv_KO_CtpD | -1.889 | 0.0 |
| H37Rv_KO_Rv1272 | -1.144 | -0.084 |
| H37Rv_KO_SugABC | 1.012 | -0.509 |
| H37Rv_KO_MbtN | 0.141 | -0.061 |
| Trans05 | -0.144 | -0.444 |
| macrophage_unactivated | 1.401 | 0.83 |
| IL1 | 0.273 | -0.611 |
| Rapamycin | 1.089 | -0.307 |
| Tcell | 1.724 | 0.59 |
| GMCSF | 1.352 | 0.478 |
| IFNab | 0.278 | 0.0 |
| IFNg | -0.329 | -0.551 |
| IFNg_GMCSF1 | -0.386 | 0.0 |
| Rv1432_day32 | 0.382 | 0.0 |
| Rv1565c_day32 | 0.0 | 0.0 |
| secA2_input | -1.246 | -1.021 |
| delta_Rv3594 | -1.455 | 0.47 |
| delta_Rv3717 | -0.629 | -0.992 |
| delta_Rv3811 | -1.938 | -1.172 |
| delta_Rv0954 | -1.606 | -1.499 |
| PonA1 | -1.07 | -0.286 |
| EccD1_KO | 2.312 | 0.178 |
| EspI_KO | 0.456 | 0.0 |
| PE35_KO | 0.957 | -0.166 |
| PPE68_KO | 0.432 | 0.813 |
| glycerol2 | -0.957 | -1.202 |
| lignocerate | -1.889 | -1.55 |
| oleate | 0.469 | -0.345 |
| phosphatidylcholine | -1.119 | -0.803 |
| acetate | -1.378 | -0.663 |
| glucAc | -2.208 | -1.831 |
| Rv0950ko | -0.519 | 0.172 |
| Rv1096ko | -1.354 | -0.555 |
| Rv3684ko | 1.172 | -0.393 |
| delta_otsA_trehalose | -0.096 | 0.564 |