Top 10 genes with highest correlation to Rv2919c/glnB:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0887c/- | (cc=0.6094) | info on Rv0887c/- |
| Rv0570/nrdZ | (cc=0.5991) | info on Rv0570/nrdZ |
| Rv1974/- | (cc=0.5892) | info on Rv1974/- |
| Rv3445c/esxU | (cc=0.5796) | info on Rv3445c/esxU |
| Rv2532c/- | (cc=0.5295) | info on Rv2532c/- |
| Rv2499c/- | (cc=0.5179) | info on Rv2499c/- |
| Rv1718/- | (cc=0.5137) | info on Rv1718/- |
| Rv2328/PE23 | (cc=0.5103) | info on Rv2328/PE23 |
| Rv0561c/- | (cc=0.5074) | info on Rv0561c/- |
| Rv2237/- | (cc=0.5017) | info on Rv2237/- |
Correlation of Rv2919c/glnB with Rv3445c/esxU
Normalized LFCs for Rv2919c/glnB:
(description and provenance of datasets)
| Rv2919c/glnB | Rv3445c/esxU | |
| Fe_supp_jason_reseq | 0.508 | -0.854 |
| low_pH_jason_reseq | 0.539 | -0.778 |
| NO_jason_reseq | -0.331 | 0.011 |
| B6_jason_reseq | 3.226 | 1.196 |
| MHCII_jason_reseq | 2.315 | 1.337 |
| Isoniazid02 | 0.146 | 0.106 |
| Rifampicin4 | -1.949 | -0.208 |
| Ethambutol3 | -0.505 | 0.054 |
| Meropenem3 | -0.763 | 1.584 |
| Vancomycin16 | -0.138 | -0.061 |
| Rv2680_day32 | 0.131 | -0.72 |
| H37Rv_KO_MarP | -1.841 | -0.801 |
| hypoxia_3wks | -0.347 | -0.379 |
| hypoxia_6wks | -0.658 | -0.205 |
| glycerol | -0.029 | -1.697 |
| cholesterol | 0.141 | -0.468 |
| AJ | 0.402 | -0.069 |
| Bibs02 | 1.428 | 0.633 |
| Bibs02c | -0.797 | 0.33 |
| BL6 | -1.492 | -1.139 |
| BL6a | -1.217 | -0.598 |
| BXD01 | 0.193 | -0.715 |
| BXD010 | -1.416 | -1.243 |
| BXD011 | -0.433 | -0.593 |
| BXD03 | -1.103 | -0.593 |
| BXD04 | 0.288 | -0.114 |
| BXD05 | -0.725 | -1.909 |
| BXD06 | -0.143 | -1.022 |
| BXD07 | -0.194 | -1.357 |
| BXD08 | -1.586 | -0.366 |
| BXD09 | -1.06 | -1.355 |
| CAST | 1.308 | -0.158 |
| CCcont | -0.209 | -1.298 |
| DS01 | 0.979 | 0.956 |
| DS02 | 0.857 | 1.1 |
| DS04 | -0.208 | 0.305 |
| DS0c | 0.855 | 0.544 |
| GP01 | 0.275 | 0.275 |
| GP02 | -0.955 | 0.421 |
| GP0c | 0.377 | 0.528 |
| NOD | -0.314 | -0.83 |
| NZO | -1.026 | -0.335 |
| PWK | 0.111 | -0.033 |
| H37Rv_KO_CtpC | 1.418 | -0.86 |
| H37Rv_KO_CtpD | -2.487 | -3.872 |
| H37Rv_KO_Rv1272 | -2.414 | -3.257 |
| H37Rv_KO_SugABC | -1.696 | -1.838 |
| H37Rv_KO_MbtN | -1.38 | -0.933 |
| Trans05 | -1.024 | -1.718 |
| macrophage_unactivated | 0.354 | 0.379 |
| IL1 | -0.119 | -0.214 |
| Rapamycin | 0.454 | -0.301 |
| Tcell | 0.124 | 0.254 |
| GMCSF | 0.296 | 0.528 |
| IFNab | 0.656 | -0.2 |
| IFNg | -1.513 | -1.053 |
| IFNg_GMCSF1 | 1.364 | 1.109 |
| Rv1432_day32 | 0.329 | 0.567 |
| Rv1565c_day32 | 0.0 | 0.232 |
| secA2_input | 0.163 | 2.519 |
| delta_Rv3594 | 1.41 | 0.0 |
| delta_Rv3717 | 1.305 | -0.189 |
| delta_Rv3811 | 0.831 | -0.335 |
| delta_Rv0954 | 0.435 | 0.758 |
| PonA1 | 1.887 | 0.427 |
| EccD1_KO | 0.898 | 0.47 |
| EspI_KO | 0.485 | 0.747 |
| PE35_KO | 2.042 | 1.158 |
| PPE68_KO | 1.181 | -0.022 |
| glycerol2 | 1.044 | 0.867 |
| lignocerate | 2.125 | 0.96 |
| oleate | -2.481 | 0.988 |
| phosphatidylcholine | 2.008 | 0.81 |
| acetate | 3.511 | 1.335 |
| glucAc | 2.806 | 0.023 |
| Rv0950ko | 1.508 | 1.375 |
| Rv1096ko | 1.176 | 2.576 |
| Rv3684ko | 0.314 | 1.772 |
| delta_otsA_trehalose | -0.366 | -1.792 |