Top 10 genes with highest correlation to Rv2919c/glnB:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0887c/- | (cc=0.6094) | info on Rv0887c/- |
| Rv0570/nrdZ | (cc=0.5991) | info on Rv0570/nrdZ |
| Rv1974/- | (cc=0.5892) | info on Rv1974/- |
| Rv3445c/esxU | (cc=0.5796) | info on Rv3445c/esxU |
| Rv2532c/- | (cc=0.5295) | info on Rv2532c/- |
| Rv2499c/- | (cc=0.5179) | info on Rv2499c/- |
| Rv1718/- | (cc=0.5137) | info on Rv1718/- |
| Rv2328/PE23 | (cc=0.5103) | info on Rv2328/PE23 |
| Rv0561c/- | (cc=0.5074) | info on Rv0561c/- |
| Rv2237/- | (cc=0.5017) | info on Rv2237/- |
Correlation of Rv2919c/glnB with Rv0887c/-
Normalized LFCs for Rv2919c/glnB:
(description and provenance of datasets)
| Rv2919c/glnB | Rv0887c/- | |
| Fe_supp_jason_reseq | 0.508 | 0.415 |
| low_pH_jason_reseq | 0.539 | -0.599 |
| NO_jason_reseq | -0.331 | 2.392 |
| B6_jason_reseq | 3.226 | 2.335 |
| MHCII_jason_reseq | 2.315 | 2.223 |
| Isoniazid02 | 0.146 | 0.304 |
| Rifampicin4 | -1.949 | 0.051 |
| Ethambutol3 | -0.505 | -0.381 |
| Meropenem3 | -0.763 | 0.781 |
| Vancomycin16 | -0.138 | 1.666 |
| Rv2680_day32 | 0.131 | -0.413 |
| H37Rv_KO_MarP | -1.841 | 0.0 |
| hypoxia_3wks | -0.347 | -1.475 |
| hypoxia_6wks | -0.658 | -0.382 |
| glycerol | -0.029 | 0.541 |
| cholesterol | 0.141 | 0.71 |
| AJ | 0.402 | 0.138 |
| Bibs02 | 1.428 | 0.0 |
| Bibs02c | -0.797 | 1.035 |
| BL6 | -1.492 | -0.935 |
| BL6a | -1.217 | 0.36 |
| BXD01 | 0.193 | -0.542 |
| BXD010 | -1.416 | -2.717 |
| BXD011 | -0.433 | -1.316 |
| BXD03 | -1.103 | -2.012 |
| BXD04 | 0.288 | -0.048 |
| BXD05 | -0.725 | -0.545 |
| BXD06 | -0.143 | -1.152 |
| BXD07 | -0.194 | -1.677 |
| BXD08 | -1.586 | -1.219 |
| BXD09 | -1.06 | -1.702 |
| CAST | 1.308 | 0.185 |
| CCcont | -0.209 | 0.183 |
| DS01 | 0.979 | 0.577 |
| DS02 | 0.857 | 1.712 |
| DS04 | -0.208 | 0.087 |
| DS0c | 0.855 | 1.684 |
| GP01 | 0.275 | -1.0 |
| GP02 | -0.955 | -1.673 |
| GP0c | 0.377 | -0.714 |
| NOD | -0.314 | -0.412 |
| NZO | -1.026 | -0.785 |
| PWK | 0.111 | 0.24 |
| H37Rv_KO_CtpC | 1.418 | 0.061 |
| H37Rv_KO_CtpD | -2.487 | -1.885 |
| H37Rv_KO_Rv1272 | -2.414 | -0.464 |
| H37Rv_KO_SugABC | -1.696 | 0.306 |
| H37Rv_KO_MbtN | -1.38 | -1.749 |
| Trans05 | -1.024 | -3.216 |
| macrophage_unactivated | 0.354 | -1.098 |
| IL1 | -0.119 | -0.572 |
| Rapamycin | 0.454 | -3.397 |
| Tcell | 0.124 | 0.401 |
| GMCSF | 0.296 | -0.668 |
| IFNab | 0.656 | -1.466 |
| IFNg | -1.513 | -2.673 |
| IFNg_GMCSF1 | 1.364 | -1.304 |
| Rv1432_day32 | 0.329 | 0.0 |
| Rv1565c_day32 | 0.0 | -0.398 |
| secA2_input | 0.163 | -1.461 |
| delta_Rv3594 | 1.41 | 1.337 |
| delta_Rv3717 | 1.305 | 1.495 |
| delta_Rv3811 | 0.831 | 3.062 |
| delta_Rv0954 | 0.435 | 2.013 |
| PonA1 | 1.887 | 2.604 |
| EccD1_KO | 0.898 | -0.895 |
| EspI_KO | 0.485 | -0.776 |
| PE35_KO | 2.042 | 0.831 |
| PPE68_KO | 1.181 | -0.374 |
| glycerol2 | 1.044 | 2.844 |
| lignocerate | 2.125 | 3.288 |
| oleate | -2.481 | -0.179 |
| phosphatidylcholine | 2.008 | 2.962 |
| acetate | 3.511 | 3.586 |
| glucAc | 2.806 | 2.946 |
| Rv0950ko | 1.508 | 1.251 |
| Rv1096ko | 1.176 | 1.921 |
| Rv3684ko | 0.314 | 1.294 |
| delta_otsA_trehalose | -0.366 | -1.092 |