Top 10 genes with highest correlation to Rv2868c/gcpE:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3624c/hpt | (cc=0.5014) | info on Rv3624c/hpt |
| Rv3757c/proW | (cc=0.4651) | info on Rv3757c/proW |
| Rv2831/echA16 | (cc=0.4555) | info on Rv2831/echA16 |
| Rv1247c/relB | (cc=0.4453) | info on Rv1247c/relB |
| Rv3449/mycP4 | (cc=0.4328) | info on Rv3449/mycP4 |
| Rv2013/- | (cc=0.4316) | info on Rv2013/- |
| Rv0219/- | (cc=0.4313) | info on Rv0219/- |
| Rv3168/- | (cc=0.4311) | info on Rv3168/- |
| Rv2164c/- | (cc=0.4284) | info on Rv2164c/- |
| Rv3635/- | (cc=0.4266) | info on Rv3635/- |
Correlation of Rv2868c/gcpE with Rv3624c/hpt
Normalized LFCs for Rv2868c/gcpE:
(description and provenance of datasets)
| Rv2868c/gcpE | Rv3624c/hpt | |
| Fe_supp_jason_reseq | 0.0 | 0.218 |
| low_pH_jason_reseq | 0.231 | 0.0 |
| NO_jason_reseq | 0.0 | 0.0 |
| B6_jason_reseq | 0.421 | 0.0 |
| MHCII_jason_reseq | 0.0 | 0.0 |
| Isoniazid02 | 2.386 | 2.043 |
| Rifampicin4 | -0.758 | 0.433 |
| Ethambutol3 | -0.34 | 0.285 |
| Meropenem3 | -0.335 | -0.335 |
| Vancomycin16 | 0.111 | 0.218 |
| Rv2680_day32 | 0.0 | 0.0 |
| H37Rv_KO_MarP | 0.35 | 0.35 |
| hypoxia_3wks | -0.427 | -0.885 |
| hypoxia_6wks | -0.727 | -0.727 |
| glycerol | -0.234 | 1.121 |
| cholesterol | 0.29 | 2.098 |
| AJ | -0.573 | 0.983 |
| Bibs02 | 0.873 | 0.183 |
| Bibs02c | -1.005 | 0.0 |
| BL6 | -0.839 | 0.238 |
| BL6a | -0.785 | 0.198 |
| BXD01 | 0.318 | 0.64 |
| BXD010 | -0.859 | 0.0 |
| BXD011 | -0.854 | 0.0 |
| BXD03 | -0.649 | 0.135 |
| BXD04 | -0.83 | 0.607 |
| BXD05 | -0.646 | 0.0 |
| BXD06 | -0.641 | 0.254 |
| BXD07 | -0.549 | 0.264 |
| BXD08 | -0.892 | 0.0 |
| BXD09 | -0.252 | 0.386 |
| CAST | 1.018 | 0.439 |
| CCcont | -1.002 | 1.231 |
| DS01 | 1.208 | 0.83 |
| DS02 | -1.045 | 0.0 |
| DS04 | 0.474 | 0.194 |
| DS0c | -0.859 | 0.596 |
| GP01 | -0.662 | 0.0 |
| GP02 | -0.558 | 0.0 |
| GP0c | -0.872 | 0.0 |
| NOD | 1.224 | 0.0 |
| NZO | 0.107 | 0.0 |
| PWK | 0.563 | 0.0 |
| H37Rv_KO_CtpC | -0.292 | 0.0 |
| H37Rv_KO_CtpD | -0.723 | 0.0 |
| H37Rv_KO_Rv1272 | 0.0 | 0.141 |
| H37Rv_KO_SugABC | -0.565 | 0.099 |
| H37Rv_KO_MbtN | 0.158 | 0.0 |
| Trans05 | -0.876 | 0.131 |
| macrophage_unactivated | 0.0 | 0.0 |
| IL1 | -0.409 | -0.409 |
| Rapamycin | -0.424 | -0.424 |
| Tcell | -0.45 | -0.45 |
| GMCSF | -0.364 | 0.0 |
| IFNab | -0.417 | -0.417 |
| IFNg | -0.369 | -0.369 |
| IFNg_GMCSF1 | 0.0 | -0.434 |
| Rv1432_day32 | -2.216 | 0.0 |
| Rv1565c_day32 | 0.0 | 0.0 |
| secA2_input | 0.504 | -1.133 |
| delta_Rv3594 | 0.369 | 1.127 |
| delta_Rv3717 | 0.438 | -0.405 |
| delta_Rv3811 | 0.518 | -0.306 |
| delta_Rv0954 | 0.917 | 1.526 |
| PonA1 | 1.3 | 0.394 |
| EccD1_KO | -1.121 | -1.365 |
| EspI_KO | -2.247 | -2.053 |
| PE35_KO | -1.596 | -0.475 |
| PPE68_KO | -1.411 | -0.342 |
| glycerol2 | -1.607 | -1.876 |
| lignocerate | -1.397 | -1.736 |
| oleate | -0.36 | -1.67 |
| phosphatidylcholine | -1.098 | -2.578 |
| acetate | -1.586 | -0.635 |
| glucAc | -1.687 | -0.808 |
| Rv0950ko | 0.582 | 0.639 |
| Rv1096ko | 0.0 | 0.832 |
| Rv3684ko | -1.14 | 0.0 |
| delta_otsA_trehalose | 0.654 | 0.0 |