Top 10 genes with highest correlation to Rv2866/relG:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3122/- | (cc=0.4651) | info on Rv3122/- |
| Rv2129c/- | (cc=0.4422) | info on Rv2129c/- |
| Rv1196/PPE18 | (cc=0.4281) | info on Rv1196/PPE18 |
| Rv1361c/PPE19 | (cc=0.4252) | info on Rv1361c/PPE19 |
| Rv0021c/- | (cc=0.4242) | info on Rv0021c/- |
| Rv3860/- | (cc=0.4222) | info on Rv3860/- |
| Rv3509c/ilvX | (cc=0.4176) | info on Rv3509c/ilvX |
| Rv0179c/lprO | (cc=0.4105) | info on Rv0179c/lprO |
| Rv3755c/- | (cc=0.4102) | info on Rv3755c/- |
| Rv1528c/papA4 | (cc=0.4084) | info on Rv1528c/papA4 |
Correlation of Rv2866/relG with Rv1361c/PPE19
Normalized LFCs for Rv2866/relG:
(description and provenance of datasets)
| Rv2866/relG | Rv1361c/PPE19 | |
| Fe_supp_jason_reseq | -0.748 | -0.249 |
| low_pH_jason_reseq | -0.848 | -1.268 |
| NO_jason_reseq | -0.362 | -0.633 |
| B6_jason_reseq | -0.335 | -0.993 |
| MHCII_jason_reseq | 0.341 | 0.491 |
| Isoniazid02 | 2.271 | 0.923 |
| Rifampicin4 | -0.536 | 0.0 |
| Ethambutol3 | 1.063 | 0.815 |
| Meropenem3 | 0.091 | 0.231 |
| Vancomycin16 | 0.427 | 0.255 |
| Rv2680_day32 | -0.597 | 0.305 |
| H37Rv_KO_MarP | -0.371 | 0.0 |
| hypoxia_3wks | 0.124 | -0.044 |
| hypoxia_6wks | 0.631 | 0.196 |
| glycerol | 0.456 | 0.363 |
| cholesterol | 0.348 | -0.222 |
| AJ | 1.415 | 0.563 |
| Bibs02 | 1.06 | -0.344 |
| Bibs02c | 0.294 | 0.121 |
| BL6 | 0.463 | 0.029 |
| BL6a | 0.379 | 0.641 |
| BXD01 | -0.472 | 0.822 |
| BXD010 | 0.245 | 0.316 |
| BXD011 | 0.615 | 2.544 |
| BXD03 | 0.913 | 0.661 |
| BXD04 | 0.463 | 0.519 |
| BXD05 | 0.196 | 0.673 |
| BXD06 | -0.033 | 0.171 |
| BXD07 | 0.542 | 0.466 |
| BXD08 | 0.187 | 0.499 |
| BXD09 | 1.001 | 0.461 |
| CAST | -0.247 | -0.127 |
| CCcont | 0.33 | -0.25 |
| DS01 | -0.072 | 0.529 |
| DS02 | -1.022 | -0.288 |
| DS04 | 1.112 | 0.679 |
| DS0c | -0.662 | 0.927 |
| GP01 | -1.923 | 0.0 |
| GP02 | -0.316 | 0.94 |
| GP0c | -0.184 | -0.047 |
| NOD | -1.3 | -0.675 |
| NZO | 0.048 | 0.539 |
| PWK | 0.87 | 0.0 |
| H37Rv_KO_CtpC | -0.197 | 0.308 |
| H37Rv_KO_CtpD | 1.612 | 0.485 |
| H37Rv_KO_Rv1272 | 0.808 | 0.642 |
| H37Rv_KO_SugABC | 1.511 | 0.66 |
| H37Rv_KO_MbtN | 1.31 | 0.534 |
| Trans05 | 0.543 | 1.011 |
| macrophage_unactivated | -0.341 | 0.65 |
| IL1 | 0.273 | -0.119 |
| Rapamycin | -0.598 | -0.399 |
| Tcell | -0.29 | -0.13 |
| GMCSF | -0.359 | 0.298 |
| IFNab | 0.23 | -0.414 |
| IFNg | -0.441 | -0.502 |
| IFNg_GMCSF1 | -0.167 | 0.201 |
| Rv1432_day32 | 0.055 | 0.696 |
| Rv1565c_day32 | -1.245 | 0.101 |
| secA2_input | -0.207 | -0.232 |
| delta_Rv3594 | -0.023 | 0.405 |
| delta_Rv3717 | -0.194 | -0.096 |
| delta_Rv3811 | -0.266 | 0.403 |
| delta_Rv0954 | 0.18 | 0.102 |
| PonA1 | 1.39 | 0.212 |
| EccD1_KO | -0.674 | -0.973 |
| EspI_KO | -0.742 | -0.134 |
| PE35_KO | -0.925 | -0.152 |
| PPE68_KO | -0.979 | -0.749 |
| glycerol2 | -0.528 | -0.24 |
| lignocerate | -0.824 | -0.522 |
| oleate | -0.123 | 0.35 |
| phosphatidylcholine | -0.265 | 0.228 |
| acetate | -0.545 | -0.713 |
| glucAc | -0.318 | -0.75 |
| Rv0950ko | 1.481 | -0.537 |
| Rv1096ko | 0.679 | -0.347 |
| Rv3684ko | -0.21 | -0.193 |
| delta_otsA_trehalose | -0.052 | -1.003 |