Top 10 genes with highest correlation to Rv2853/PE_PGRS48:
update plot | correlation | link to info on gene |
---|---|---|
Rv2352c/PPE38 | (cc=0.5372) | info on Rv2352c/PPE38 |
Rv3223c/sigH | (cc=0.5123) | info on Rv3223c/sigH |
Rv3045/adhC | (cc=0.512) | info on Rv3045/adhC |
Rv0940c/- | (cc=0.5046) | info on Rv0940c/- |
Rv3142c/- | (cc=0.4999) | info on Rv3142c/- |
Rv0072/- | (cc=0.4958) | info on Rv0072/- |
Rv0160c/PE4 | (cc=0.4773) | info on Rv0160c/PE4 |
Rv3814c/- | (cc=0.4734) | info on Rv3814c/- |
Rv3397c/phyA | (cc=0.464) | info on Rv3397c/phyA |
Rv1498c/- | (cc=0.4635) | info on Rv1498c/- |
Correlation of Rv2853/PE_PGRS48 with Rv3814c/-
Normalized LFCs for Rv2853/PE_PGRS48:
(description and provenance of datasets)
Rv2853/PE_PGRS48 | Rv3814c/- | |
Fe_supp_jason_reseq | 0.641 | 0.843 |
low_pH_jason_reseq | -0.269 | -0.532 |
NO_jason_reseq | 0.06 | -3.221 |
B6_jason_reseq | -0.414 | 1.44 |
MHCII_jason_reseq | -0.425 | 0.822 |
Isoniazid02 | -0.965 | -1.988 |
Rifampicin4 | 0.095 | -2.385 |
Ethambutol3 | 0.258 | -0.117 |
Meropenem3 | -1.22 | -2.199 |
Vancomycin16 | -0.788 | -2.555 |
Rv2680_day32 | -0.666 | -0.695 |
H37Rv_KO_MarP | -0.206 | 0.586 |
hypoxia_3wks | -0.335 | 0.283 |
hypoxia_6wks | -0.72 | -0.654 |
glycerol | 0.587 | 1.088 |
cholesterol | 0.29 | 1.401 |
AJ | 0.881 | -0.116 |
Bibs02 | 0.199 | 0.436 |
Bibs02c | 0.273 | 1.246 |
BL6 | 0.488 | 2.058 |
BL6a | 0.462 | 1.597 |
BXD01 | 0.269 | 1.763 |
BXD010 | 0.324 | 2.224 |
BXD011 | 0.519 | 1.226 |
BXD03 | 0.679 | 0.36 |
BXD04 | 0.39 | 1.847 |
BXD05 | 0.242 | 1.45 |
BXD06 | 0.507 | 1.617 |
BXD07 | 0.494 | 1.823 |
BXD08 | 0.497 | 2.195 |
BXD09 | 0.213 | 1.283 |
CAST | 0.475 | 0.48 |
CCcont | 0.574 | 1.762 |
DS01 | 0.24 | 0.674 |
DS02 | -0.408 | 1.249 |
DS04 | 0.623 | 0.202 |
DS0c | 0.0 | 1.662 |
GP01 | -0.129 | 1.015 |
GP02 | 0.108 | 1.175 |
GP0c | -0.182 | 1.283 |
NOD | 0.61 | 0.4 |
NZO | 0.344 | -1.049 |
PWK | 0.078 | 0.247 |
H37Rv_KO_CtpC | 0.235 | 0.522 |
H37Rv_KO_CtpD | 0.174 | 1.78 |
H37Rv_KO_Rv1272 | 0.811 | 1.986 |
H37Rv_KO_SugABC | -0.084 | 1.432 |
H37Rv_KO_MbtN | 0.659 | 1.409 |
Trans05 | 1.389 | 2.239 |
macrophage_unactivated | -0.262 | 0.363 |
IL1 | -0.196 | -0.839 |
Rapamycin | -0.227 | -0.144 |
Tcell | -0.381 | 0.798 |
GMCSF | -0.404 | -0.605 |
IFNab | -0.435 | -0.469 |
IFNg | -0.043 | -0.909 |
IFNg_GMCSF1 | -0.182 | -0.456 |
Rv1432_day32 | -0.018 | 0.465 |
Rv1565c_day32 | 1.512 | 0.733 |
secA2_input | -0.747 | -0.947 |
delta_Rv3594 | -0.017 | 0.988 |
delta_Rv3717 | 0.169 | 1.559 |
delta_Rv3811 | 0.271 | 1.277 |
delta_Rv0954 | -0.42 | 0.729 |
PonA1 | 0.667 | -0.233 |
EccD1_KO | 0.0 | 0.855 |
EspI_KO | 0.493 | 0.046 |
PE35_KO | 0.175 | 0.047 |
PPE68_KO | -0.134 | 0.518 |
glycerol2 | -0.078 | 1.447 |
lignocerate | 0.444 | 1.391 |
oleate | -0.016 | 0.15 |
phosphatidylcholine | 0.245 | 1.119 |
acetate | 0.053 | 1.275 |
glucAc | 0.15 | 0.865 |
Rv0950ko | 0.283 | 0.733 |
Rv1096ko | 0.654 | 0.121 |
Rv3684ko | 0.845 | 0.426 |
delta_otsA_trehalose | 0.127 | -1.489 |