Top 10 genes with highest correlation to Rv2824c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2350c/plcB | (cc=0.5927) | info on Rv2350c/plcB |
| Rv3818/- | (cc=0.5639) | info on Rv3818/- |
| Rv3759c/proX | (cc=0.5609) | info on Rv3759c/proX |
| Rv1616/- | (cc=0.5399) | info on Rv1616/- |
| Rv0059/- | (cc=0.5385) | info on Rv0059/- |
| Rv2929/- | (cc=0.5355) | info on Rv2929/- |
| Rv1752/- | (cc=0.5351) | info on Rv1752/- |
| Rv3694c/- | (cc=0.522) | info on Rv3694c/- |
| Rv3150/nuoF | (cc=0.5211) | info on Rv3150/nuoF |
| Rv2185c/TB16.3 | (cc=0.5154) | info on Rv2185c/TB16.3 |
Correlation of Rv2824c/- with Rv3818/-
Normalized LFCs for Rv2824c/-:
(description and provenance of datasets)
| Rv2824c/- | Rv3818/- | |
| Fe_supp_jason_reseq | -0.028 | -0.103 |
| low_pH_jason_reseq | -0.898 | -1.643 |
| NO_jason_reseq | -0.194 | -0.121 |
| B6_jason_reseq | -0.418 | -3.085 |
| MHCII_jason_reseq | -1.175 | -2.252 |
| Isoniazid02 | 0.089 | 1.234 |
| Rifampicin4 | -0.634 | -3.579 |
| Ethambutol3 | -0.038 | 0.377 |
| Meropenem3 | -0.012 | -0.771 |
| Vancomycin16 | 0.186 | -3.321 |
| Rv2680_day32 | -0.603 | 0.796 |
| H37Rv_KO_MarP | 0.394 | -2.515 |
| hypoxia_3wks | 0.969 | 2.592 |
| hypoxia_6wks | 1.66 | 2.946 |
| glycerol | 0.699 | -0.791 |
| cholesterol | -0.237 | 0.645 |
| AJ | -0.266 | -1.837 |
| Bibs02 | -0.768 | 0.474 |
| Bibs02c | -0.324 | 0.067 |
| BL6 | 0.774 | 1.975 |
| BL6a | 0.377 | 1.897 |
| BXD01 | 0.675 | 1.939 |
| BXD010 | 0.691 | 3.057 |
| BXD011 | 0.654 | 2.413 |
| BXD03 | 0.274 | 3.807 |
| BXD04 | 0.402 | 2.431 |
| BXD05 | 0.946 | 2.693 |
| BXD06 | 0.878 | 2.991 |
| BXD07 | 0.829 | 2.302 |
| BXD08 | 0.101 | 1.691 |
| BXD09 | 0.678 | 2.345 |
| CAST | -0.601 | -0.794 |
| CCcont | 0.494 | 3.269 |
| DS01 | 0.099 | 0.842 |
| DS02 | -0.063 | -0.072 |
| DS04 | 0.559 | 2.485 |
| DS0c | 0.016 | 0.966 |
| GP01 | -0.363 | 0.747 |
| GP02 | 0.359 | 0.829 |
| GP0c | 0.082 | 1.295 |
| NOD | -0.116 | -0.88 |
| NZO | -0.014 | -1.087 |
| PWK | 0.149 | -0.132 |
| H37Rv_KO_CtpC | 0.753 | 2.081 |
| H37Rv_KO_CtpD | 0.931 | 1.548 |
| H37Rv_KO_Rv1272 | -0.184 | 1.572 |
| H37Rv_KO_SugABC | 0.408 | 1.297 |
| H37Rv_KO_MbtN | 0.078 | 4.543 |
| Trans05 | 0.699 | 2.32 |
| macrophage_unactivated | -0.085 | 0.739 |
| IL1 | 0.139 | -0.341 |
| Rapamycin | 0.0 | 0.095 |
| Tcell | 0.541 | 0.443 |
| GMCSF | 0.106 | 0.51 |
| IFNab | -0.408 | 1.59 |
| IFNg | 0.278 | 1.114 |
| IFNg_GMCSF1 | -0.022 | -0.641 |
| Rv1432_day32 | 0.424 | 2.214 |
| Rv1565c_day32 | -0.336 | 0.218 |
| secA2_input | -0.042 | -1.506 |
| delta_Rv3594 | -0.112 | 0.017 |
| delta_Rv3717 | -0.552 | 1.251 |
| delta_Rv3811 | -0.455 | 0.858 |
| delta_Rv0954 | -0.346 | -2.768 |
| PonA1 | -0.531 | -0.682 |
| EccD1_KO | -1.095 | -0.826 |
| EspI_KO | -0.157 | -0.245 |
| PE35_KO | 0.105 | 0.324 |
| PPE68_KO | 0.333 | -0.275 |
| glycerol2 | -0.074 | -0.738 |
| lignocerate | 0.347 | -1.76 |
| oleate | -0.237 | -0.364 |
| phosphatidylcholine | 0.22 | -2.681 |
| acetate | 0.113 | 0.188 |
| glucAc | 0.07 | 0.06 |
| Rv0950ko | -0.045 | -1.426 |
| Rv1096ko | -0.44 | -0.434 |
| Rv3684ko | -0.049 | -0.472 |
| delta_otsA_trehalose | -0.338 | -1.157 |