TnSeqCorr

Top 10 genes with highest correlation to Rv2824c/-:

update plotcorrelationlink to info on gene
Rv2350c/plcB (cc=0.5927) info on Rv2350c/plcB
Rv3818/- (cc=0.5639) info on Rv3818/-
Rv3759c/proX (cc=0.5609) info on Rv3759c/proX
Rv1616/- (cc=0.5399) info on Rv1616/-
Rv0059/- (cc=0.5385) info on Rv0059/-
Rv2929/- (cc=0.5355) info on Rv2929/-
Rv1752/- (cc=0.5351) info on Rv1752/-
Rv3694c/- (cc=0.522) info on Rv3694c/-
Rv3150/nuoF (cc=0.5211) info on Rv3150/nuoF
Rv2185c/TB16.3 (cc=0.5154) info on Rv2185c/TB16.3

Correlation of Rv2824c/- with Rv2350c/plcB

Normalized LFCs for Rv2824c/-:
(description and provenance of datasets)
Rv2824c/-Rv2350c/plcB
Fe_supp_jason_reseq

-0.028

0.153

low_pH_jason_reseq

-0.898

-0.32

NO_jason_reseq

-0.194

-0.116

B6_jason_reseq

-0.418

-0.249

MHCII_jason_reseq

-1.175

-0.936

Isoniazid02

0.089

-0.953

Rifampicin4

-0.634

-0.022

Ethambutol3

-0.038

0.525

Meropenem3

-0.012

-0.677

Vancomycin16

0.186

-0.501

Rv2680_day32

-0.603

0.171

H37Rv_KO_MarP

0.394

0.286

hypoxia_3wks

0.969

2.285

hypoxia_6wks

1.66

2.076

glycerol

0.699

-0.12

cholesterol

-0.237

0.923

AJ

-0.266

0.445

Bibs02

-0.768

0.579

Bibs02c

-0.324

-0.38

BL6

0.774

0.747

BL6a

0.377

0.951

BXD01

0.675

0.845

BXD010

0.691

1.313

BXD011

0.654

0.691

BXD03

0.274

1.102

BXD04

0.402

1.076

BXD05

0.946

1.051

BXD06

0.878

0.598

BXD07

0.829

0.931

BXD08

0.101

0.805

BXD09

0.678

0.694

CAST

-0.601

0.098

CCcont

0.494

0.588

DS01

0.099

-0.31

DS02

-0.063

-0.739

DS04

0.559

0.736

DS0c

0.016

-0.376

GP01

-0.363

0.581

GP02

0.359

-0.13

GP0c

0.082

0.257

NOD

-0.116

1.66

NZO

-0.014

0.153

PWK

0.149

0.364

H37Rv_KO_CtpC

0.753

0.853

H37Rv_KO_CtpD

0.931

1.379

H37Rv_KO_Rv1272

-0.184

0.921

H37Rv_KO_SugABC

0.408

0.438

H37Rv_KO_MbtN

0.078

0.495

Trans05

0.699

1.562

macrophage_unactivated

-0.085

0.041

IL1

0.139

0.454

Rapamycin

0.0

0.021

Tcell

0.541

0.596

GMCSF

0.106

-0.09

IFNab

-0.408

-0.103

IFNg

0.278

0.358

IFNg_GMCSF1

-0.022

0.041

Rv1432_day32

0.424

0.576

Rv1565c_day32

-0.336

-0.115

secA2_input

-0.042

0.102

delta_Rv3594

-0.112

0.225

delta_Rv3717

-0.552

0.104

delta_Rv3811

-0.455

0.677

delta_Rv0954

-0.346

0.107

PonA1

-0.531

0.053

EccD1_KO

-1.095

-0.408

EspI_KO

-0.157

-0.317

PE35_KO

0.105

-0.458

PPE68_KO

0.333

-0.355

glycerol2

-0.074

0.465

lignocerate

0.347

0.057

oleate

-0.237

0.435

phosphatidylcholine

0.22

0.29

acetate

0.113

-0.186

glucAc

0.07

-0.038

Rv0950ko

-0.045

0.371

Rv1096ko

-0.44

-0.467

Rv3684ko

-0.049

0.386

delta_otsA_trehalose

-0.338

0.081