Top 10 genes with highest correlation to Rv2742c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2566/- | (cc=0.5835) | info on Rv2566/- |
| Rv1774/- | (cc=0.5641) | info on Rv1774/- |
| Rv1744c/- | (cc=0.5355) | info on Rv1744c/- |
| Rv1923/lipD | (cc=0.5339) | info on Rv1923/lipD |
| Rv1781c/malQ | (cc=0.5286) | info on Rv1781c/malQ |
| Rv1467c/fadE15 | (cc=0.5181) | info on Rv1467c/fadE15 |
| Rv2062c/cobN | (cc=0.5063) | info on Rv2062c/cobN |
| Rv2639c/- | (cc=0.4957) | info on Rv2639c/- |
| Rv3065/mmr | (cc=0.4906) | info on Rv3065/mmr |
| Rv2082/- | (cc=0.4899) | info on Rv2082/- |
Correlation of Rv2742c/- with Rv2062c/cobN
Normalized LFCs for Rv2742c/-:
(description and provenance of datasets)
| Rv2742c/- | Rv2062c/cobN | |
| Fe_supp_jason_reseq | -0.242 | -0.444 |
| low_pH_jason_reseq | -0.281 | -0.746 |
| NO_jason_reseq | 0.286 | -0.299 |
| B6_jason_reseq | 0.417 | 0.135 |
| MHCII_jason_reseq | 0.158 | -0.388 |
| Isoniazid02 | -1.627 | -0.851 |
| Rifampicin4 | 0.536 | 0.338 |
| Ethambutol3 | -0.933 | -0.946 |
| Meropenem3 | -0.29 | -1.174 |
| Vancomycin16 | -0.478 | -0.451 |
| Rv2680_day32 | 0.714 | 0.197 |
| H37Rv_KO_MarP | 0.33 | -0.106 |
| hypoxia_3wks | -0.347 | -0.175 |
| hypoxia_6wks | 0.136 | 0.384 |
| glycerol | 0.635 | -0.6 |
| cholesterol | -0.338 | 0.017 |
| AJ | 0.2 | 0.355 |
| Bibs02 | -0.224 | 0.298 |
| Bibs02c | 0.006 | 0.32 |
| BL6 | -0.016 | -0.107 |
| BL6a | -0.61 | -0.527 |
| BXD01 | -0.835 | -0.233 |
| BXD010 | -0.44 | -0.719 |
| BXD011 | -0.262 | -1.168 |
| BXD03 | -0.132 | -0.843 |
| BXD04 | -0.845 | -0.598 |
| BXD05 | -0.588 | -0.531 |
| BXD06 | -0.269 | -0.723 |
| BXD07 | -0.185 | -0.477 |
| BXD08 | -0.035 | -0.525 |
| BXD09 | -0.656 | -0.789 |
| CAST | 0.095 | 0.28 |
| CCcont | -0.595 | -0.353 |
| DS01 | -0.289 | 0.212 |
| DS02 | -0.197 | 0.717 |
| DS04 | 0.162 | 0.975 |
| DS0c | -0.446 | -0.185 |
| GP01 | 1.056 | -0.442 |
| GP02 | 1.149 | 0.767 |
| GP0c | 0.194 | -0.469 |
| NOD | 0.234 | -0.192 |
| NZO | -0.273 | 0.0 |
| PWK | 0.134 | -0.219 |
| H37Rv_KO_CtpC | -0.075 | -0.291 |
| H37Rv_KO_CtpD | -0.169 | 0.154 |
| H37Rv_KO_Rv1272 | 0.253 | -0.313 |
| H37Rv_KO_SugABC | 0.771 | 0.658 |
| H37Rv_KO_MbtN | 0.083 | 0.331 |
| Trans05 | -0.38 | 0.172 |
| macrophage_unactivated | -0.606 | -0.65 |
| IL1 | -0.415 | -0.78 |
| Rapamycin | -0.5 | -0.387 |
| Tcell | -0.762 | -0.671 |
| GMCSF | 0.436 | -0.129 |
| IFNab | -0.653 | -0.224 |
| IFNg | 0.291 | -0.551 |
| IFNg_GMCSF1 | 0.386 | 0.434 |
| Rv1432_day32 | 0.349 | 0.458 |
| Rv1565c_day32 | -1.193 | -0.13 |
| secA2_input | -0.095 | -0.545 |
| delta_Rv3594 | 0.564 | -0.135 |
| delta_Rv3717 | 0.804 | 0.122 |
| delta_Rv3811 | 0.748 | -0.086 |
| delta_Rv0954 | 0.279 | -0.322 |
| PonA1 | 0.256 | 0.032 |
| EccD1_KO | 0.681 | 1.046 |
| EspI_KO | 0.607 | 0.528 |
| PE35_KO | 0.303 | 0.169 |
| PPE68_KO | -0.211 | 0.246 |
| glycerol2 | 0.441 | 0.143 |
| lignocerate | 0.661 | 0.55 |
| oleate | 0.343 | 0.088 |
| phosphatidylcholine | 0.49 | 0.224 |
| acetate | 0.475 | 0.479 |
| glucAc | 0.793 | 0.385 |
| Rv0950ko | -0.154 | 0.41 |
| Rv1096ko | -0.425 | 0.464 |
| Rv3684ko | -0.321 | 0.445 |
| delta_otsA_trehalose | -0.212 | -0.953 |