Top 10 genes with highest correlation to Rv2730/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0820/phoT | (cc=0.6249) | info on Rv0820/phoT |
| Rv0930/pstA1 | (cc=0.6197) | info on Rv0930/pstA1 |
| Rv0929/pstC2 | (cc=0.6153) | info on Rv0929/pstC2 |
| Rv0928/pstS3 | (cc=0.6003) | info on Rv0928/pstS3 |
| Rv3050c/- | (cc=0.5873) | info on Rv3050c/- |
| Rv2279/- | (cc=0.5868) | info on Rv2279/- |
| Rv3232c/ppk2 | (cc=0.5707) | info on Rv3232c/ppk2 |
| Rv2814c/- | (cc=0.5661) | info on Rv2814c/- |
| Rv2479c/- | (cc=0.5648) | info on Rv2479c/- |
| Rv3187/- | (cc=0.5591) | info on Rv3187/- |
Correlation of Rv2730/- with Rv0928/pstS3
Normalized LFCs for Rv2730/-:
(description and provenance of datasets)
| Rv2730/- | Rv0928/pstS3 | |
| Fe_supp_jason_reseq | -0.497 | -3.391 |
| low_pH_jason_reseq | -0.304 | 1.549 |
| NO_jason_reseq | -0.113 | -3.363 |
| B6_jason_reseq | -1.853 | 0.406 |
| MHCII_jason_reseq | -0.93 | 0.372 |
| Isoniazid02 | -0.499 | 0.156 |
| Rifampicin4 | -0.514 | -4.059 |
| Ethambutol3 | 0.636 | -0.989 |
| Meropenem3 | -1.533 | -2.653 |
| Vancomycin16 | -1.011 | -2.26 |
| Rv2680_day32 | 1.433 | 3.982 |
| H37Rv_KO_MarP | 0.645 | -2.74 |
| hypoxia_3wks | -0.981 | -3.413 |
| hypoxia_6wks | -0.28 | 1.128 |
| glycerol | 0.38 | 4.051 |
| cholesterol | 0.392 | 3.767 |
| AJ | 0.287 | 1.99 |
| Bibs02 | 0.592 | 1.819 |
| Bibs02c | 0.344 | 2.23 |
| BL6 | 0.77 | 5.545 |
| BL6a | 0.997 | 6.0 |
| BXD01 | 0.404 | 6.0 |
| BXD010 | 0.517 | 6.0 |
| BXD011 | 1.284 | 6.0 |
| BXD03 | 0.797 | 5.608 |
| BXD04 | 0.732 | 6.0 |
| BXD05 | 1.264 | 6.0 |
| BXD06 | 0.822 | 6.0 |
| BXD07 | 1.492 | 6.0 |
| BXD08 | 0.755 | 6.0 |
| BXD09 | 0.843 | 6.0 |
| CAST | 0.434 | 2.334 |
| CCcont | 0.344 | 3.228 |
| DS01 | 0.351 | 0.0 |
| DS02 | 0.682 | 0.101 |
| DS04 | 0.319 | 2.0 |
| DS0c | 0.68 | 1.053 |
| GP01 | 0.536 | 5.887 |
| GP02 | 0.106 | 5.592 |
| GP0c | 0.059 | 6.0 |
| NOD | 0.517 | 0.649 |
| NZO | 0.11 | 2.227 |
| PWK | -0.213 | 4.575 |
| H37Rv_KO_CtpC | 1.034 | 3.13 |
| H37Rv_KO_CtpD | 0.063 | 1.414 |
| H37Rv_KO_Rv1272 | 0.551 | 4.357 |
| H37Rv_KO_SugABC | 1.139 | 3.955 |
| H37Rv_KO_MbtN | 0.337 | 6.0 |
| Trans05 | 1.448 | 5.513 |
| macrophage_unactivated | -0.426 | -2.632 |
| IL1 | -0.077 | -3.073 |
| Rapamycin | -0.872 | -3.492 |
| Tcell | -0.701 | -2.47 |
| GMCSF | -0.016 | -3.11 |
| IFNab | -0.375 | 2.618 |
| IFNg | -0.516 | -5.161 |
| IFNg_GMCSF1 | -0.239 | -4.672 |
| Rv1432_day32 | 1.087 | 6.0 |
| Rv1565c_day32 | -0.032 | -0.314 |
| secA2_input | -0.888 | -1.969 |
| delta_Rv3594 | 0.823 | -0.055 |
| delta_Rv3717 | 0.622 | 2.024 |
| delta_Rv3811 | 0.773 | 0.581 |
| delta_Rv0954 | 1.071 | -3.635 |
| PonA1 | 0.855 | -3.624 |
| EccD1_KO | -0.418 | -2.447 |
| EspI_KO | 0.22 | -1.258 |
| PE35_KO | 0.015 | -0.557 |
| PPE68_KO | 0.189 | -1.51 |
| glycerol2 | -1.013 | -4.89 |
| lignocerate | -0.51 | -1.422 |
| oleate | -1.165 | -3.927 |
| phosphatidylcholine | -0.311 | -2.553 |
| acetate | -0.249 | -0.17 |
| glucAc | -0.028 | -0.089 |
| Rv0950ko | 0.651 | -3.986 |
| Rv1096ko | -0.118 | 1.674 |
| Rv3684ko | -0.203 | 0.082 |
| delta_otsA_trehalose | -0.107 | -0.532 |