Top 10 genes with highest correlation to Rv2722/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1871c/- | (cc=0.6053) | info on Rv1871c/- |
| Rv2977c/thiL | (cc=0.5835) | info on Rv2977c/thiL |
| Rv2721c/- | (cc=0.583) | info on Rv2721c/- |
| Rv2929/- | (cc=0.5342) | info on Rv2929/- |
| Rv1335/cysO | (cc=0.4661) | info on Rv1335/cysO |
| Rv2038c/- | (cc=0.4641) | info on Rv2038c/- |
| Rv1616/- | (cc=0.4588) | info on Rv1616/- |
| Rv1582c/- | (cc=0.4516) | info on Rv1582c/- |
| Rv1931c/- | (cc=0.4227) | info on Rv1931c/- |
| Rv0877/- | (cc=0.4213) | info on Rv0877/- |
Correlation of Rv2722/- with Rv2977c/thiL
Normalized LFCs for Rv2722/-:
(description and provenance of datasets)
| Rv2722/- | Rv2977c/thiL | |
| Fe_supp_jason_reseq | -2.115 | -1.994 |
| low_pH_jason_reseq | 0.038 | 0.457 |
| NO_jason_reseq | 2.659 | 1.205 |
| B6_jason_reseq | -1.441 | -1.402 |
| MHCII_jason_reseq | -2.043 | -1.234 |
| Isoniazid02 | 0.987 | 0.0 |
| Rifampicin4 | 2.588 | 0.558 |
| Ethambutol3 | 0.795 | 0.365 |
| Meropenem3 | 0.834 | 1.198 |
| Vancomycin16 | -0.05 | 0.0 |
| Rv2680_day32 | -2.163 | 0.0 |
| H37Rv_KO_MarP | 0.296 | 0.825 |
| hypoxia_3wks | 1.435 | 0.0 |
| hypoxia_6wks | 3.282 | 1.222 |
| glycerol | -0.75 | -0.709 |
| cholesterol | -0.609 | -0.509 |
| AJ | -0.514 | -0.815 |
| Bibs02 | -0.824 | -0.642 |
| Bibs02c | -0.174 | -0.735 |
| BL6 | 1.918 | -0.439 |
| BL6a | 0.248 | -0.696 |
| BXD01 | 0.472 | -0.458 |
| BXD010 | 1.281 | -0.45 |
| BXD011 | 0.514 | -0.448 |
| BXD03 | 0.782 | -0.475 |
| BXD04 | 0.226 | -0.434 |
| BXD05 | 1.563 | -0.473 |
| BXD06 | 1.39 | -0.469 |
| BXD07 | 0.206 | -0.486 |
| BXD08 | 0.378 | -0.467 |
| BXD09 | 0.555 | -0.494 |
| CAST | -0.549 | -0.809 |
| CCcont | -0.719 | -0.525 |
| DS01 | 0.181 | -0.83 |
| DS02 | -0.31 | -0.764 |
| DS04 | -1.268 | -0.682 |
| DS0c | 0.14 | -0.762 |
| GP01 | 1.792 | 2.629 |
| GP02 | 0.369 | 0.353 |
| GP0c | 1.513 | 0.733 |
| NOD | 0.521 | -0.566 |
| NZO | -0.526 | -0.701 |
| PWK | -0.094 | -0.689 |
| H37Rv_KO_CtpC | 0.0 | -0.571 |
| H37Rv_KO_CtpD | 0.959 | 2.576 |
| H37Rv_KO_Rv1272 | -0.695 | -0.495 |
| H37Rv_KO_SugABC | 0.486 | -0.348 |
| H37Rv_KO_MbtN | 1.012 | -0.362 |
| Trans05 | 1.203 | -0.459 |
| macrophage_unactivated | -0.057 | 0.0 |
| IL1 | 0.133 | 0.0 |
| Rapamycin | -0.172 | 0.0 |
| Tcell | -0.573 | 0.0 |
| GMCSF | -0.251 | 0.0 |
| IFNab | 0.269 | 0.0 |
| IFNg | -0.668 | 0.0 |
| IFNg_GMCSF1 | 1.166 | 0.0 |
| Rv1432_day32 | 0.159 | 0.0 |
| Rv1565c_day32 | 0.663 | 0.0 |
| secA2_input | -1.991 | 0.0 |
| delta_Rv3594 | -1.358 | -1.427 |
| delta_Rv3717 | -1.748 | -1.346 |
| delta_Rv3811 | -1.023 | -0.721 |
| delta_Rv0954 | -0.966 | -1.383 |
| PonA1 | -1.863 | -1.235 |
| EccD1_KO | 1.003 | 0.865 |
| EspI_KO | -0.408 | 0.394 |
| PE35_KO | 1.006 | 1.706 |
| PPE68_KO | 1.062 | 1.552 |
| glycerol2 | -0.153 | 0.0 |
| lignocerate | -0.275 | 0.0 |
| oleate | 2.768 | 0.0 |
| phosphatidylcholine | -0.734 | 0.0 |
| acetate | 1.327 | 0.0 |
| glucAc | 0.144 | 0.0 |
| Rv0950ko | -0.525 | -2.222 |
| Rv1096ko | -1.282 | -1.873 |
| Rv3684ko | -0.924 | -1.359 |
| delta_otsA_trehalose | 0.584 | -0.965 |