Top 10 genes with highest correlation to Rv2696c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2190c/- | (cc=0.7379) | info on Rv2190c/- |
| Rv1836c/- | (cc=0.6532) | info on Rv1836c/- |
| Rv1821/secA2 | (cc=0.607) | info on Rv1821/secA2 |
| Rv0019c/fhaB | (cc=0.5833) | info on Rv0019c/fhaB |
| Rv0385/- | (cc=0.5786) | info on Rv0385/- |
| Rv1421/- | (cc=0.5704) | info on Rv1421/- |
| Rv2553c/- | (cc=0.5658) | info on Rv2553c/- |
| Rv1565c/- | (cc=0.565) | info on Rv1565c/- |
| Rv3330/dacB1 | (cc=0.5628) | info on Rv3330/dacB1 |
| Rv0017c/rodA | (cc=0.556) | info on Rv0017c/rodA |
Correlation of Rv2696c/- with Rv2553c/-
Normalized LFCs for Rv2696c/-:
(description and provenance of datasets)
| Rv2696c/- | Rv2553c/- | |
| Fe_supp_jason_reseq | 2.276 | 3.321 |
| low_pH_jason_reseq | 0.843 | 0.0 |
| NO_jason_reseq | -0.294 | 0.0 |
| B6_jason_reseq | 0.047 | 0.0 |
| MHCII_jason_reseq | -0.228 | 0.0 |
| Isoniazid02 | -1.775 | -0.965 |
| Rifampicin4 | -0.241 | -1.795 |
| Ethambutol3 | -3.006 | -0.958 |
| Meropenem3 | -2.344 | 0.0 |
| Vancomycin16 | -0.623 | -2.457 |
| Rv2680_day32 | -1.481 | 0.0 |
| H37Rv_KO_MarP | -5.136 | -6.0 |
| hypoxia_3wks | -0.77 | -0.55 |
| hypoxia_6wks | 1.462 | -0.288 |
| glycerol | -1.181 | 0.0 |
| cholesterol | 1.678 | 0.145 |
| AJ | -0.914 | 0.0 |
| Bibs02 | 1.405 | 0.0 |
| Bibs02c | 0.45 | 0.0 |
| BL6 | 0.357 | 0.0 |
| BL6a | 1.313 | 0.198 |
| BXD01 | 0.664 | 0.0 |
| BXD010 | 2.192 | 0.0 |
| BXD011 | 0.65 | 0.243 |
| BXD03 | 1.318 | 0.0 |
| BXD04 | 1.019 | 0.0 |
| BXD05 | 2.54 | 0.369 |
| BXD06 | 1.422 | 0.0 |
| BXD07 | 1.083 | 0.0 |
| BXD08 | 0.923 | 0.0 |
| BXD09 | 1.158 | 0.0 |
| CAST | -2.039 | 0.0 |
| CCcont | 2.208 | 2.448 |
| DS01 | 0.78 | 0.0 |
| DS02 | 1.336 | 0.0 |
| DS04 | 1.434 | 0.682 |
| DS0c | 0.0 | 0.0 |
| GP01 | 1.734 | 0.0 |
| GP02 | 2.198 | 0.0 |
| GP0c | 1.762 | 0.0 |
| NOD | -0.885 | 0.0 |
| NZO | -1.631 | 0.0 |
| PWK | -1.878 | 0.0 |
| H37Rv_KO_CtpC | 0.094 | 0.162 |
| H37Rv_KO_CtpD | 0.143 | 0.445 |
| H37Rv_KO_Rv1272 | 0.912 | 0.0 |
| H37Rv_KO_SugABC | 1.137 | 0.42 |
| H37Rv_KO_MbtN | 2.563 | 0.987 |
| Trans05 | 1.447 | 0.131 |
| macrophage_unactivated | 0.969 | 0.0 |
| IL1 | 0.561 | -0.715 |
| Rapamycin | 0.58 | -0.74 |
| Tcell | -0.042 | -0.785 |
| GMCSF | 1.267 | -1.001 |
| IFNab | 0.834 | 0.323 |
| IFNg | 0.567 | -0.644 |
| IFNg_GMCSF1 | -0.041 | -0.361 |
| Rv1432_day32 | 1.295 | 0.0 |
| Rv1565c_day32 | -1.995 | 0.0 |
| secA2_input | -3.311 | -1.825 |
| delta_Rv3594 | 0.727 | 2.723 |
| delta_Rv3717 | 2.114 | 3.292 |
| delta_Rv3811 | 1.46 | 1.578 |
| delta_Rv0954 | 0.983 | -0.797 |
| PonA1 | 0.055 | 0.921 |
| EccD1_KO | -0.312 | -0.51 |
| EspI_KO | -1.235 | -1.101 |
| PE35_KO | -1.698 | -1.476 |
| PPE68_KO | -0.825 | -0.602 |
| glycerol2 | -0.27 | -0.68 |
| lignocerate | 0.392 | -0.591 |
| oleate | -0.588 | -0.688 |
| phosphatidylcholine | -0.581 | -0.679 |
| acetate | 1.736 | -0.806 |
| glucAc | 0.78 | -0.501 |
| Rv0950ko | -2.421 | -6.0 |
| Rv1096ko | -0.603 | -0.042 |
| Rv3684ko | -0.714 | 1.166 |
| delta_otsA_trehalose | 3.153 | -0.917 |