Top 10 genes with highest correlation to Rv2696c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2190c/- | (cc=0.7379) | info on Rv2190c/- |
| Rv1836c/- | (cc=0.6532) | info on Rv1836c/- |
| Rv1821/secA2 | (cc=0.607) | info on Rv1821/secA2 |
| Rv0019c/fhaB | (cc=0.5833) | info on Rv0019c/fhaB |
| Rv0385/- | (cc=0.5786) | info on Rv0385/- |
| Rv1421/- | (cc=0.5704) | info on Rv1421/- |
| Rv2553c/- | (cc=0.5658) | info on Rv2553c/- |
| Rv1565c/- | (cc=0.565) | info on Rv1565c/- |
| Rv3330/dacB1 | (cc=0.5628) | info on Rv3330/dacB1 |
| Rv0017c/rodA | (cc=0.556) | info on Rv0017c/rodA |
Correlation of Rv2696c/- with Rv2190c/-
Normalized LFCs for Rv2696c/-:
(description and provenance of datasets)
| Rv2696c/- | Rv2190c/- | |
| Fe_supp_jason_reseq | 2.276 | 2.516 |
| low_pH_jason_reseq | 0.843 | -0.221 |
| NO_jason_reseq | -0.294 | -3.877 |
| B6_jason_reseq | 0.047 | -0.596 |
| MHCII_jason_reseq | -0.228 | -0.565 |
| Isoniazid02 | -1.775 | 0.563 |
| Rifampicin4 | -0.241 | -3.541 |
| Ethambutol3 | -3.006 | -2.182 |
| Meropenem3 | -2.344 | -0.786 |
| Vancomycin16 | -0.623 | -4.51 |
| Rv2680_day32 | -1.481 | 2.417 |
| H37Rv_KO_MarP | -5.136 | -6.0 |
| hypoxia_3wks | -0.77 | -2.767 |
| hypoxia_6wks | 1.462 | -0.228 |
| glycerol | -1.181 | -0.098 |
| cholesterol | 1.678 | 2.214 |
| AJ | -0.914 | -1.276 |
| Bibs02 | 1.405 | 0.993 |
| Bibs02c | 0.45 | 1.306 |
| BL6 | 0.357 | 3.063 |
| BL6a | 1.313 | 2.749 |
| BXD01 | 0.664 | 2.595 |
| BXD010 | 2.192 | 2.438 |
| BXD011 | 0.65 | 2.323 |
| BXD03 | 1.318 | 2.42 |
| BXD04 | 1.019 | 2.446 |
| BXD05 | 2.54 | 3.337 |
| BXD06 | 1.422 | 3.167 |
| BXD07 | 1.083 | 2.933 |
| BXD08 | 0.923 | 2.286 |
| BXD09 | 1.158 | 3.087 |
| CAST | -2.039 | -1.088 |
| CCcont | 2.208 | 3.364 |
| DS01 | 0.78 | 1.001 |
| DS02 | 1.336 | 0.0 |
| DS04 | 1.434 | 1.359 |
| DS0c | 0.0 | 1.298 |
| GP01 | 1.734 | 1.498 |
| GP02 | 2.198 | -0.128 |
| GP0c | 1.762 | 1.031 |
| NOD | -0.885 | -1.061 |
| NZO | -1.631 | -1.263 |
| PWK | -1.878 | -0.786 |
| H37Rv_KO_CtpC | 0.094 | 2.295 |
| H37Rv_KO_CtpD | 0.143 | 1.805 |
| H37Rv_KO_Rv1272 | 0.912 | 2.512 |
| H37Rv_KO_SugABC | 1.137 | 1.815 |
| H37Rv_KO_MbtN | 2.563 | 4.046 |
| Trans05 | 1.447 | 2.172 |
| macrophage_unactivated | 0.969 | 0.076 |
| IL1 | 0.561 | 0.575 |
| Rapamycin | 0.58 | -0.23 |
| Tcell | -0.042 | -0.329 |
| GMCSF | 1.267 | 0.568 |
| IFNab | 0.834 | 1.103 |
| IFNg | 0.567 | 1.563 |
| IFNg_GMCSF1 | -0.041 | 0.575 |
| Rv1432_day32 | 1.295 | 2.996 |
| Rv1565c_day32 | -1.995 | 0.0 |
| secA2_input | -3.311 | -4.612 |
| delta_Rv3594 | 0.727 | 2.299 |
| delta_Rv3717 | 2.114 | 2.896 |
| delta_Rv3811 | 1.46 | 2.019 |
| delta_Rv0954 | 0.983 | 0.358 |
| PonA1 | 0.055 | -0.825 |
| EccD1_KO | -0.312 | -1.766 |
| EspI_KO | -1.235 | -1.634 |
| PE35_KO | -1.698 | -3.246 |
| PPE68_KO | -0.825 | -1.411 |
| glycerol2 | -0.27 | -0.531 |
| lignocerate | 0.392 | -0.462 |
| oleate | -0.588 | -0.537 |
| phosphatidylcholine | -0.581 | -0.531 |
| acetate | 1.736 | 1.15 |
| glucAc | 0.78 | 0.213 |
| Rv0950ko | -2.421 | -6.0 |
| Rv1096ko | -0.603 | -1.176 |
| Rv3684ko | -0.714 | -0.364 |
| delta_otsA_trehalose | 3.153 | 1.066 |