Top 10 genes with highest correlation to Rv2694c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2691/ceoB | (cc=0.8857) | info on Rv2691/ceoB |
| Rv2692/ceoC | (cc=0.765) | info on Rv2692/ceoC |
| Rv3200c/- | (cc=0.6311) | info on Rv3200c/- |
| Rv1364c/- | (cc=0.5583) | info on Rv1364c/- |
| Rv0407/fgd1 | (cc=0.4976) | info on Rv0407/fgd1 |
| Rv1807/PPE31 | (cc=0.4902) | info on Rv1807/PPE31 |
| Rv0989c/grcC2 | (cc=0.4901) | info on Rv0989c/grcC2 |
| Rv1808/PPE32 | (cc=0.4848) | info on Rv1808/PPE32 |
| Rv3154/nuoJ | (cc=0.4815) | info on Rv3154/nuoJ |
| Rv3661/- | (cc=0.4787) | info on Rv3661/- |
Correlation of Rv2694c/- with Rv2691/ceoB
Normalized LFCs for Rv2694c/-:
(description and provenance of datasets)
| Rv2694c/- | Rv2691/ceoB | |
| Fe_supp_jason_reseq | 2.28 | 1.026 |
| low_pH_jason_reseq | 0.629 | 0.301 |
| NO_jason_reseq | -5.355 | -6.0 |
| B6_jason_reseq | 0.348 | -0.992 |
| MHCII_jason_reseq | 1.021 | 0.56 |
| Isoniazid02 | 0.776 | 0.953 |
| Rifampicin4 | 2.245 | 2.477 |
| Ethambutol3 | 0.216 | 0.209 |
| Meropenem3 | 2.93 | 0.964 |
| Vancomycin16 | 3.605 | 3.672 |
| Rv2680_day32 | 0.177 | -1.619 |
| H37Rv_KO_MarP | -1.04 | -1.672 |
| hypoxia_3wks | -1.934 | -2.349 |
| hypoxia_6wks | 3.399 | 4.402 |
| glycerol | 1.358 | 0.209 |
| cholesterol | 5.656 | 3.009 |
| AJ | -2.123 | -1.192 |
| Bibs02 | 0.944 | 1.628 |
| Bibs02c | 2.134 | 1.776 |
| BL6 | 2.167 | 1.907 |
| BL6a | 1.058 | 1.669 |
| BXD01 | -0.226 | 0.387 |
| BXD010 | 0.76 | 1.006 |
| BXD011 | 0.037 | 0.961 |
| BXD03 | 0.97 | 1.239 |
| BXD04 | -0.372 | 0.952 |
| BXD05 | 0.925 | 1.251 |
| BXD06 | 0.28 | 1.068 |
| BXD07 | 0.665 | 0.844 |
| BXD08 | -0.121 | 0.119 |
| BXD09 | 0.191 | 0.349 |
| CAST | -2.274 | -1.855 |
| CCcont | 1.743 | 1.939 |
| DS01 | 3.579 | 3.181 |
| DS02 | 3.981 | 3.362 |
| DS04 | 1.968 | 2.67 |
| DS0c | 2.682 | 2.654 |
| GP01 | 0.0 | 0.557 |
| GP02 | -0.791 | -1.009 |
| GP0c | -0.27 | 1.216 |
| NOD | -2.218 | -1.041 |
| NZO | -3.568 | -3.12 |
| PWK | -2.626 | -1.007 |
| H37Rv_KO_CtpC | 1.377 | 1.214 |
| H37Rv_KO_CtpD | 0.204 | 0.975 |
| H37Rv_KO_Rv1272 | 1.159 | 1.065 |
| H37Rv_KO_SugABC | -0.718 | 1.343 |
| H37Rv_KO_MbtN | 3.149 | 2.285 |
| Trans05 | 1.779 | 1.547 |
| macrophage_unactivated | 0.025 | 1.215 |
| IL1 | -0.899 | -1.323 |
| Rapamycin | -0.715 | -0.681 |
| Tcell | -0.251 | 0.443 |
| GMCSF | -0.066 | -0.502 |
| IFNab | 1.917 | 1.164 |
| IFNg | -1.839 | -0.941 |
| IFNg_GMCSF1 | -1.684 | -2.055 |
| Rv1432_day32 | -1.478 | -1.536 |
| Rv1565c_day32 | 1.297 | 1.857 |
| secA2_input | -1.09 | -1.497 |
| delta_Rv3594 | 0.236 | 1.106 |
| delta_Rv3717 | 0.297 | 0.997 |
| delta_Rv3811 | 0.054 | 0.495 |
| delta_Rv0954 | -0.209 | -0.236 |
| PonA1 | -0.204 | -0.036 |
| EccD1_KO | -0.97 | 0.25 |
| EspI_KO | 0.473 | 0.499 |
| PE35_KO | -0.193 | 0.397 |
| PPE68_KO | 0.301 | 0.928 |
| glycerol2 | -0.705 | -0.929 |
| lignocerate | -0.933 | -1.128 |
| oleate | 0.0 | 0.301 |
| phosphatidylcholine | -0.88 | -1.297 |
| acetate | 0.618 | 0.123 |
| glucAc | -0.4 | 0.409 |
| Rv0950ko | -0.92 | -0.754 |
| Rv1096ko | -0.106 | 1.001 |
| Rv3684ko | -1.068 | -0.819 |
| delta_otsA_trehalose | 0.015 | 1.391 |