Top 10 genes with highest correlation to Rv2641/cadI:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3737/- | (cc=0.5131) | info on Rv3737/- |
| Rv3395A/- | (cc=0.4934) | info on Rv3395A/- |
| Rv2473/- | (cc=0.4589) | info on Rv2473/- |
| Rv3483c/- | (cc=0.4317) | info on Rv3483c/- |
| Rv0281/- | (cc=0.4306) | info on Rv0281/- |
| Rv0267/narU | (cc=0.4214) | info on Rv0267/narU |
| Rv3288c/usfY | (cc=0.4206) | info on Rv3288c/usfY |
| Rv3321c/vapB44 | (cc=0.4145) | info on Rv3321c/vapB44 |
| Rv0329c/- | (cc=0.4112) | info on Rv0329c/- |
| Rv3064c/- | (cc=0.4111) | info on Rv3064c/- |
Correlation of Rv2641/cadI with Rv3737/-
Normalized LFCs for Rv2641/cadI:
(description and provenance of datasets)
| Rv2641/cadI | Rv3737/- | |
| Fe_supp_jason_reseq | 0.081 | 0.935 |
| low_pH_jason_reseq | 1.027 | 0.0 |
| NO_jason_reseq | 0.299 | -0.058 |
| B6_jason_reseq | 0.081 | 0.593 |
| MHCII_jason_reseq | 0.111 | 0.998 |
| Isoniazid02 | 0.281 | 0.441 |
| Rifampicin4 | -0.428 | -0.317 |
| Ethambutol3 | 0.567 | 0.045 |
| Meropenem3 | 3.128 | 3.291 |
| Vancomycin16 | 0.066 | 0.512 |
| Rv2680_day32 | -0.412 | -0.289 |
| H37Rv_KO_MarP | -0.106 | -0.336 |
| hypoxia_3wks | 0.044 | -1.483 |
| hypoxia_6wks | 0.106 | -2.326 |
| glycerol | 0.506 | -0.157 |
| cholesterol | 0.314 | 0.068 |
| AJ | -0.318 | -1.336 |
| Bibs02 | -0.266 | 0.584 |
| Bibs02c | -0.305 | -0.527 |
| BL6 | 0.291 | -0.767 |
| BL6a | -0.159 | -0.834 |
| BXD01 | 0.445 | -1.421 |
| BXD010 | 0.612 | -0.713 |
| BXD011 | 0.176 | -1.021 |
| BXD03 | -0.054 | -1.517 |
| BXD04 | 0.409 | -1.368 |
| BXD05 | 0.158 | -1.351 |
| BXD06 | -0.107 | -1.652 |
| BXD07 | 0.011 | -1.226 |
| BXD08 | 0.749 | -0.647 |
| BXD09 | 0.428 | -1.018 |
| CAST | 1.323 | -0.726 |
| CCcont | 0.388 | -0.594 |
| DS01 | -0.084 | 0.52 |
| DS02 | 0.285 | 0.572 |
| DS04 | 0.469 | 0.55 |
| DS0c | 0.225 | 0.057 |
| GP01 | 0.84 | -0.715 |
| GP02 | 0.007 | -0.434 |
| GP0c | 0.166 | -1.399 |
| NOD | 0.208 | -0.226 |
| NZO | -0.363 | -0.889 |
| PWK | -0.125 | -1.485 |
| H37Rv_KO_CtpC | -0.75 | -0.997 |
| H37Rv_KO_CtpD | 0.593 | 0.117 |
| H37Rv_KO_Rv1272 | -0.034 | -0.723 |
| H37Rv_KO_SugABC | 0.72 | -0.718 |
| H37Rv_KO_MbtN | 0.055 | -0.239 |
| Trans05 | 0.595 | -0.593 |
| macrophage_unactivated | -0.107 | -1.026 |
| IL1 | -0.323 | -0.454 |
| Rapamycin | -0.12 | -0.724 |
| Tcell | 0.124 | -1.642 |
| GMCSF | -0.544 | -0.623 |
| IFNab | -0.393 | -0.063 |
| IFNg | -0.404 | -0.973 |
| IFNg_GMCSF1 | -0.031 | -0.201 |
| Rv1432_day32 | -0.038 | -0.618 |
| Rv1565c_day32 | 1.332 | -0.232 |
| secA2_input | -0.385 | -0.388 |
| delta_Rv3594 | -0.704 | -0.028 |
| delta_Rv3717 | -0.126 | -0.164 |
| delta_Rv3811 | -0.4 | 0.696 |
| delta_Rv0954 | 0.698 | 1.315 |
| PonA1 | 1.33 | 1.571 |
| EccD1_KO | -0.296 | -0.286 |
| EspI_KO | -1.58 | -1.323 |
| PE35_KO | -0.543 | -1.744 |
| PPE68_KO | -1.353 | -1.673 |
| glycerol2 | 0.793 | 0.551 |
| lignocerate | 1.277 | 0.455 |
| oleate | 0.509 | 0.637 |
| phosphatidylcholine | 1.196 | 0.468 |
| acetate | 0.818 | 0.161 |
| glucAc | 0.41 | 0.0 |
| Rv0950ko | 0.507 | 0.365 |
| Rv1096ko | 0.618 | -0.353 |
| Rv3684ko | -0.688 | -0.586 |
| delta_otsA_trehalose | 2.781 | 0.439 |