Top 10 genes with highest correlation to Rv2639c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1970/lprM | (cc=0.6093) | info on Rv1970/lprM |
| Rv1148c/- | (cc=0.5825) | info on Rv1148c/- |
| Rv1169c/lipX | (cc=0.567) | info on Rv1169c/lipX |
| Rv2566/- | (cc=0.5567) | info on Rv2566/- |
| Rv2345/- | (cc=0.541) | info on Rv2345/- |
| Rv3566c/nat | (cc=0.5097) | info on Rv3566c/nat |
| Rv2742c/- | (cc=0.4957) | info on Rv2742c/- |
| Rv0932c/pstS2 | (cc=0.4937) | info on Rv0932c/pstS2 |
| Rv1916/aceAb | (cc=0.4747) | info on Rv1916/aceAb |
| Rv1923/lipD | (cc=0.4727) | info on Rv1923/lipD |
Correlation of Rv2639c/- with Rv1970/lprM
Normalized LFCs for Rv2639c/-:
(description and provenance of datasets)
| Rv2639c/- | Rv1970/lprM | |
| Fe_supp_jason_reseq | 0.068 | -2.152 |
| low_pH_jason_reseq | -0.085 | -2.28 |
| NO_jason_reseq | 0.362 | 0.69 |
| B6_jason_reseq | 0.114 | -0.909 |
| MHCII_jason_reseq | 0.077 | -0.886 |
| Isoniazid02 | -2.072 | -3.918 |
| Rifampicin4 | 0.152 | 0.861 |
| Ethambutol3 | -2.212 | -2.342 |
| Meropenem3 | -2.692 | -3.996 |
| Vancomycin16 | -1.276 | -1.072 |
| Rv2680_day32 | 0.489 | 0.245 |
| H37Rv_KO_MarP | 0.965 | 1.081 |
| hypoxia_3wks | 0.335 | -0.618 |
| hypoxia_6wks | 0.426 | 0.18 |
| glycerol | -0.253 | -0.976 |
| cholesterol | -0.512 | -0.31 |
| AJ | 1.292 | -0.728 |
| Bibs02 | -0.623 | 0.821 |
| Bibs02c | -0.068 | 0.599 |
| BL6 | -0.797 | -2.08 |
| BL6a | -0.65 | -0.077 |
| BXD01 | 0.011 | -0.375 |
| BXD010 | 0.291 | -1.906 |
| BXD011 | -0.14 | -0.129 |
| BXD03 | -0.102 | -0.424 |
| BXD04 | 0.692 | 1.231 |
| BXD05 | 0.194 | 0.216 |
| BXD06 | -0.031 | 1.515 |
| BXD07 | 0.037 | 0.268 |
| BXD08 | 0.041 | -0.107 |
| BXD09 | -0.126 | 0.483 |
| CAST | -0.242 | -0.722 |
| CCcont | -1.042 | -1.63 |
| DS01 | 0.303 | 0.089 |
| DS02 | -0.071 | 0.277 |
| DS04 | -0.156 | 0.921 |
| DS0c | -0.283 | 0.523 |
| GP01 | 0.061 | 1.387 |
| GP02 | 1.528 | 1.964 |
| GP0c | 0.714 | 1.151 |
| NOD | -0.425 | -1.228 |
| NZO | 0.319 | -0.118 |
| PWK | 0.558 | -0.467 |
| H37Rv_KO_CtpC | 1.378 | 1.478 |
| H37Rv_KO_CtpD | -0.976 | -0.87 |
| H37Rv_KO_Rv1272 | 0.208 | -0.028 |
| H37Rv_KO_SugABC | 0.621 | 2.408 |
| H37Rv_KO_MbtN | 0.257 | -0.437 |
| Trans05 | 0.565 | 1.621 |
| macrophage_unactivated | -1.098 | -0.761 |
| IL1 | -0.709 | 0.11 |
| Rapamycin | -0.282 | 0.826 |
| Tcell | -1.219 | 0.567 |
| GMCSF | 0.071 | -0.752 |
| IFNab | -0.484 | -0.23 |
| IFNg | 0.401 | -1.419 |
| IFNg_GMCSF1 | -0.88 | 0.0 |
| Rv1432_day32 | 0.81 | 0.209 |
| Rv1565c_day32 | -1.278 | -0.671 |
| secA2_input | 0.283 | 0.394 |
| delta_Rv3594 | 0.054 | 1.075 |
| delta_Rv3717 | 0.299 | 1.603 |
| delta_Rv3811 | 0.442 | 1.609 |
| delta_Rv0954 | 0.196 | 0.282 |
| PonA1 | 0.807 | 1.777 |
| EccD1_KO | 1.667 | 2.805 |
| EspI_KO | 0.291 | 2.718 |
| PE35_KO | 0.729 | 3.244 |
| PPE68_KO | 1.334 | 3.827 |
| glycerol2 | 0.252 | -1.775 |
| lignocerate | -0.244 | -1.543 |
| oleate | 0.59 | -1.009 |
| phosphatidylcholine | 0.465 | -1.273 |
| acetate | -0.845 | 1.942 |
| glucAc | -1.314 | -1.508 |
| Rv0950ko | 0.084 | 0.16 |
| Rv1096ko | -0.549 | -0.522 |
| Rv3684ko | -0.986 | -0.773 |
| delta_otsA_trehalose | -0.482 | 0.341 |