Top 10 genes with highest correlation to Rv2597/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1716/- | (cc=0.6118) | info on Rv1716/- |
| Rv1945/- | (cc=0.6085) | info on Rv1945/- |
| Rv1843c/guaB1 | (cc=0.5358) | info on Rv1843c/guaB1 |
| Rv1969/mce3D | (cc=0.5252) | info on Rv1969/mce3D |
| Rv3401/- | (cc=0.5192) | info on Rv3401/- |
| Rv0233/nrdB | (cc=0.5081) | info on Rv0233/nrdB |
| Rv3295/- | (cc=0.4909) | info on Rv3295/- |
| Rv2385/mbtJ | (cc=0.4821) | info on Rv2385/mbtJ |
| Rv0435c/- | (cc=0.4798) | info on Rv0435c/- |
| Rv1736c/narX | (cc=0.4712) | info on Rv1736c/narX |
Correlation of Rv2597/- with Rv1969/mce3D
Normalized LFCs for Rv2597/-:
(description and provenance of datasets)
| Rv2597/- | Rv1969/mce3D | |
| Fe_supp_jason_reseq | 0.103 | -0.5 |
| low_pH_jason_reseq | 0.055 | -1.499 |
| NO_jason_reseq | 0.108 | 0.126 |
| B6_jason_reseq | 1.732 | -0.435 |
| MHCII_jason_reseq | 0.42 | -0.789 |
| Isoniazid02 | 0.025 | 0.208 |
| Rifampicin4 | -0.084 | 0.566 |
| Ethambutol3 | -0.295 | 0.874 |
| Meropenem3 | 0.773 | 0.794 |
| Vancomycin16 | 0.027 | 0.194 |
| Rv2680_day32 | 0.286 | 0.488 |
| H37Rv_KO_MarP | 0.2 | 0.0 |
| hypoxia_3wks | 0.415 | -0.06 |
| hypoxia_6wks | 0.0 | -0.641 |
| glycerol | 0.17 | -0.995 |
| cholesterol | -0.022 | -0.713 |
| AJ | 0.59 | -0.644 |
| Bibs02 | -0.106 | -0.623 |
| Bibs02c | -0.233 | 0.205 |
| BL6 | -1.1 | -0.36 |
| BL6a | -0.474 | -0.55 |
| BXD01 | -1.32 | -1.202 |
| BXD010 | 0.096 | -1.158 |
| BXD011 | -0.321 | -0.874 |
| BXD03 | -1.485 | -0.616 |
| BXD04 | -0.968 | -0.812 |
| BXD05 | -0.44 | -0.292 |
| BXD06 | -0.817 | -0.592 |
| BXD07 | -0.673 | -1.415 |
| BXD08 | -0.017 | 0.239 |
| BXD09 | -0.632 | -0.64 |
| CAST | 0.012 | -0.35 |
| CCcont | -1.253 | -0.755 |
| DS01 | 0.419 | -0.537 |
| DS02 | 0.304 | -0.017 |
| DS04 | 0.073 | 0.412 |
| DS0c | 0.366 | -0.693 |
| GP01 | 0.519 | -0.244 |
| GP02 | 1.122 | 0.562 |
| GP0c | -0.257 | -0.546 |
| NOD | 0.119 | -0.281 |
| NZO | 0.13 | -0.048 |
| PWK | -0.364 | -0.647 |
| H37Rv_KO_CtpC | 0.312 | 0.923 |
| H37Rv_KO_CtpD | 0.712 | -0.562 |
| H37Rv_KO_Rv1272 | 0.098 | -0.103 |
| H37Rv_KO_SugABC | -0.677 | -0.824 |
| H37Rv_KO_MbtN | -0.795 | 1.226 |
| Trans05 | 0.483 | 0.48 |
| macrophage_unactivated | -1.193 | -0.126 |
| IL1 | -0.584 | 0.151 |
| Rapamycin | -0.43 | -0.203 |
| Tcell | -1.166 | -1.538 |
| GMCSF | -0.082 | -0.884 |
| IFNab | -1.769 | -0.819 |
| IFNg | -0.096 | -0.641 |
| IFNg_GMCSF1 | -0.581 | -1.543 |
| Rv1432_day32 | 0.329 | 0.495 |
| Rv1565c_day32 | 5.898 | 4.952 |
| secA2_input | 0.618 | -0.377 |
| delta_Rv3594 | -0.465 | 1.715 |
| delta_Rv3717 | 0.065 | 1.193 |
| delta_Rv3811 | -0.648 | 1.633 |
| delta_Rv0954 | 0.045 | 1.901 |
| PonA1 | -0.338 | 1.372 |
| EccD1_KO | 0.102 | -0.941 |
| EspI_KO | -0.588 | -0.131 |
| PE35_KO | -0.201 | 0.096 |
| PPE68_KO | -0.742 | -0.035 |
| glycerol2 | -0.493 | -0.214 |
| lignocerate | -0.252 | -0.172 |
| oleate | -0.811 | 0.031 |
| phosphatidylcholine | -0.367 | -0.232 |
| acetate | -0.331 | 0.502 |
| glucAc | 0.125 | -0.769 |
| Rv0950ko | 0.956 | -0.802 |
| Rv1096ko | 0.751 | 0.473 |
| Rv3684ko | 1.641 | -0.347 |
| delta_otsA_trehalose | -0.262 | 0.214 |