Top 10 genes with highest correlation to Rv2575/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1604/impA | (cc=0.5666) | info on Rv1604/impA |
| Rv1337/- | (cc=0.5428) | info on Rv1337/- |
| Rv3759c/proX | (cc=0.542) | info on Rv3759c/proX |
| Rv1561/vapC11 | (cc=0.5415) | info on Rv1561/vapC11 |
| Rv2823c/- | (cc=0.5404) | info on Rv2823c/- |
| Rv1505c/- | (cc=0.5298) | info on Rv1505c/- |
| Rv0028/- | (cc=0.5282) | info on Rv0028/- |
| Rv2038c/- | (cc=0.5238) | info on Rv2038c/- |
| Rv0181c/- | (cc=0.5197) | info on Rv0181c/- |
| Rv3150/nuoF | (cc=0.5096) | info on Rv3150/nuoF |
Correlation of Rv2575/- with Rv1604/impA
Normalized LFCs for Rv2575/-:
(description and provenance of datasets)
| Rv2575/- | Rv1604/impA | |
| Fe_supp_jason_reseq | -0.357 | -1.397 |
| low_pH_jason_reseq | 0.176 | -0.607 |
| NO_jason_reseq | 0.373 | -0.953 |
| B6_jason_reseq | -1.261 | -0.616 |
| MHCII_jason_reseq | -0.524 | -1.057 |
| Isoniazid02 | 0.285 | 0.134 |
| Rifampicin4 | -0.398 | 0.482 |
| Ethambutol3 | 0.838 | 0.191 |
| Meropenem3 | 0.375 | 0.31 |
| Vancomycin16 | 0.387 | 0.183 |
| Rv2680_day32 | -1.044 | -1.187 |
| H37Rv_KO_MarP | -0.761 | -0.351 |
| hypoxia_3wks | 1.081 | 0.439 |
| hypoxia_6wks | 1.52 | 0.0 |
| glycerol | -1.204 | 0.275 |
| cholesterol | -0.156 | 1.006 |
| AJ | 0.103 | 0.193 |
| Bibs02 | -0.391 | -0.697 |
| Bibs02c | -0.476 | 0.965 |
| BL6 | 1.269 | 1.53 |
| BL6a | 0.618 | 1.092 |
| BXD01 | 1.404 | 1.839 |
| BXD010 | 0.992 | 1.381 |
| BXD011 | 2.068 | 1.175 |
| BXD03 | 0.728 | 1.037 |
| BXD04 | 1.434 | 1.619 |
| BXD05 | 0.724 | 1.795 |
| BXD06 | 0.913 | 1.149 |
| BXD07 | 1.138 | 1.463 |
| BXD08 | 1.16 | 1.697 |
| BXD09 | 1.548 | 1.227 |
| CAST | -0.624 | 0.537 |
| CCcont | 1.381 | 1.743 |
| DS01 | -0.505 | -0.216 |
| DS02 | -1.95 | -0.34 |
| DS04 | -0.526 | -1.405 |
| DS0c | -0.787 | -0.129 |
| GP01 | -0.082 | -0.508 |
| GP02 | 0.804 | 0.871 |
| GP0c | 0.395 | 0.209 |
| NOD | 0.399 | 0.065 |
| NZO | 0.0 | 1.357 |
| PWK | -0.365 | -0.374 |
| H37Rv_KO_CtpC | -0.302 | 1.611 |
| H37Rv_KO_CtpD | 1.574 | 1.152 |
| H37Rv_KO_Rv1272 | 1.069 | -0.174 |
| H37Rv_KO_SugABC | 2.023 | 1.77 |
| H37Rv_KO_MbtN | -0.844 | -0.437 |
| Trans05 | 0.418 | 0.449 |
| macrophage_unactivated | 0.205 | -0.051 |
| IL1 | 1.017 | -0.098 |
| Rapamycin | 0.491 | -1.062 |
| Tcell | 0.241 | -0.27 |
| GMCSF | 0.533 | -0.652 |
| IFNab | 0.085 | 0.42 |
| IFNg | 0.473 | -0.711 |
| IFNg_GMCSF1 | -0.308 | -0.657 |
| Rv1432_day32 | 0.029 | 0.681 |
| Rv1565c_day32 | 0.319 | 0.381 |
| secA2_input | -0.1 | -0.146 |
| delta_Rv3594 | 0.286 | -0.707 |
| delta_Rv3717 | -0.434 | -1.091 |
| delta_Rv3811 | -0.022 | 0.134 |
| delta_Rv0954 | 1.105 | -0.963 |
| PonA1 | -0.354 | -0.261 |
| EccD1_KO | -1.023 | -0.523 |
| EspI_KO | -0.171 | -0.453 |
| PE35_KO | 0.0 | -0.178 |
| PPE68_KO | -0.656 | -0.618 |
| glycerol2 | 0.429 | 0.614 |
| lignocerate | 0.688 | 1.294 |
| oleate | 0.014 | 0.621 |
| phosphatidylcholine | 0.891 | 1.053 |
| acetate | 0.884 | 1.285 |
| glucAc | 0.515 | 1.143 |
| Rv0950ko | 0.166 | 1.414 |
| Rv1096ko | 0.042 | 1.08 |
| Rv3684ko | -0.046 | 0.35 |
| delta_otsA_trehalose | 3.259 | 1.383 |