Top 10 genes with highest correlation to Rv2553c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1836c/- | (cc=0.8859) | info on Rv1836c/- |
| Rv3102c/ftsE | (cc=0.8112) | info on Rv3102c/ftsE |
| Rv3101c/ftsX | (cc=0.7945) | info on Rv3101c/ftsX |
| Rv3671c/- | (cc=0.7418) | info on Rv3671c/- |
| Rv2837c/- | (cc=0.7308) | info on Rv2837c/- |
| Rv1565c/- | (cc=0.7196) | info on Rv1565c/- |
| Rv1821/secA2 | (cc=0.6983) | info on Rv1821/secA2 |
| Rv3593/lpqF | (cc=0.6952) | info on Rv3593/lpqF |
| Rv2190c/- | (cc=0.6903) | info on Rv2190c/- |
| Rv1080c/greA | (cc=0.6866) | info on Rv1080c/greA |
Correlation of Rv2553c/- with Rv1836c/-
Normalized LFCs for Rv2553c/-:
(description and provenance of datasets)
| Rv2553c/- | Rv1836c/- | |
| Fe_supp_jason_reseq | 3.321 | 3.703 |
| low_pH_jason_reseq | 0.0 | -0.44 |
| NO_jason_reseq | 0.0 | -0.69 |
| B6_jason_reseq | 0.0 | -0.292 |
| MHCII_jason_reseq | 0.0 | 0.492 |
| Isoniazid02 | -0.965 | -2.187 |
| Rifampicin4 | -1.795 | -2.943 |
| Ethambutol3 | -0.958 | -1.216 |
| Meropenem3 | 0.0 | -1.533 |
| Vancomycin16 | -2.457 | -2.653 |
| Rv2680_day32 | 0.0 | 1.226 |
| H37Rv_KO_MarP | -6.0 | -6.0 |
| hypoxia_3wks | -0.55 | -0.961 |
| hypoxia_6wks | -0.288 | -0.503 |
| glycerol | 0.0 | -0.202 |
| cholesterol | 0.145 | 0.253 |
| AJ | 0.0 | -0.232 |
| Bibs02 | 0.0 | -0.183 |
| Bibs02c | 0.0 | -0.209 |
| BL6 | 0.0 | 1.02 |
| BL6a | 0.198 | 1.339 |
| BXD01 | 0.0 | 1.272 |
| BXD010 | 0.0 | 0.323 |
| BXD011 | 0.243 | 1.988 |
| BXD03 | 0.0 | 0.341 |
| BXD04 | 0.0 | 0.563 |
| BXD05 | 0.369 | 1.21 |
| BXD06 | 0.0 | 0.523 |
| BXD07 | 0.0 | 0.865 |
| BXD08 | 0.0 | 1.248 |
| BXD09 | 0.0 | 0.95 |
| CAST | 0.0 | 0.21 |
| CCcont | 2.448 | 2.888 |
| DS01 | 0.0 | -0.236 |
| DS02 | 0.0 | -0.217 |
| DS04 | 0.682 | 0.883 |
| DS0c | 0.0 | 0.0 |
| GP01 | 0.0 | 0.964 |
| GP02 | 0.0 | 1.165 |
| GP0c | 0.0 | 1.002 |
| NOD | 0.0 | -0.225 |
| NZO | 0.0 | -0.199 |
| PWK | 0.0 | -0.196 |
| H37Rv_KO_CtpC | 0.162 | 0.739 |
| H37Rv_KO_CtpD | 0.445 | 0.918 |
| H37Rv_KO_Rv1272 | 0.0 | 0.953 |
| H37Rv_KO_SugABC | 0.42 | 1.362 |
| H37Rv_KO_MbtN | 0.987 | 1.116 |
| Trans05 | 0.131 | 1.066 |
| macrophage_unactivated | 0.0 | 0.669 |
| IL1 | -0.715 | 0.0 |
| Rapamycin | -0.74 | 0.227 |
| Tcell | -0.785 | 0.0 |
| GMCSF | -1.001 | 0.38 |
| IFNab | 0.323 | 1.844 |
| IFNg | -0.644 | 1.058 |
| IFNg_GMCSF1 | -0.361 | 0.452 |
| Rv1432_day32 | 0.0 | 1.748 |
| Rv1565c_day32 | 0.0 | 0.0 |
| secA2_input | -1.825 | -2.174 |
| delta_Rv3594 | 2.723 | 2.695 |
| delta_Rv3717 | 3.292 | 3.555 |
| delta_Rv3811 | 1.578 | 2.842 |
| delta_Rv0954 | -0.797 | -1.461 |
| PonA1 | 0.921 | -1.387 |
| EccD1_KO | -0.51 | 0.148 |
| EspI_KO | -1.101 | -0.051 |
| PE35_KO | -1.476 | -1.496 |
| PPE68_KO | -0.602 | 0.0 |
| glycerol2 | -0.68 | -0.193 |
| lignocerate | -0.591 | -0.168 |
| oleate | -0.688 | -0.196 |
| phosphatidylcholine | -0.679 | -0.193 |
| acetate | -0.806 | 0.0 |
| glucAc | -0.501 | -0.143 |
| Rv0950ko | -6.0 | -6.0 |
| Rv1096ko | -0.042 | -0.03 |
| Rv3684ko | 1.166 | 1.677 |
| delta_otsA_trehalose | -0.917 | -0.288 |