Top 10 genes with highest correlation to Rv2542/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2915c/- | (cc=0.4718) | info on Rv2915c/- |
| Rv0517/- | (cc=0.4411) | info on Rv0517/- |
| Rv2226/- | (cc=0.4188) | info on Rv2226/- |
| Rv3129/- | (cc=0.4055) | info on Rv3129/- |
| Rv2322c/rocD1 | (cc=0.4048) | info on Rv2322c/rocD1 |
| Rv2306B/- | (cc=0.402) | info on Rv2306B/- |
| Rv0406c/- | (cc=0.4001) | info on Rv0406c/- |
| Rv1250/- | (cc=0.3984) | info on Rv1250/- |
| Rv0895/- | (cc=0.3963) | info on Rv0895/- |
| Rv0265c/- | (cc=0.3953) | info on Rv0265c/- |
Correlation of Rv2542/- with Rv2915c/-
Normalized LFCs for Rv2542/-:
(description and provenance of datasets)
| Rv2542/- | Rv2915c/- | |
| Fe_supp_jason_reseq | 0.513 | 0.384 |
| low_pH_jason_reseq | -0.82 | -0.564 |
| NO_jason_reseq | -0.257 | 0.612 |
| B6_jason_reseq | -0.109 | 0.963 |
| MHCII_jason_reseq | 0.142 | 1.18 |
| Isoniazid02 | -0.195 | -0.583 |
| Rifampicin4 | 0.273 | 0.447 |
| Ethambutol3 | -0.235 | -0.488 |
| Meropenem3 | 0.283 | 0.519 |
| Vancomycin16 | -0.093 | -0.255 |
| Rv2680_day32 | 0.538 | -0.528 |
| H37Rv_KO_MarP | 0.082 | 0.073 |
| hypoxia_3wks | 1.049 | 0.742 |
| hypoxia_6wks | 0.973 | 0.651 |
| glycerol | -0.253 | 0.138 |
| cholesterol | -0.129 | 0.216 |
| AJ | -0.146 | 0.709 |
| Bibs02 | 0.166 | -0.307 |
| Bibs02c | 0.74 | 0.365 |
| BL6 | -0.006 | -0.887 |
| BL6a | 0.415 | 0.059 |
| BXD01 | -0.333 | -0.79 |
| BXD010 | -0.075 | -0.556 |
| BXD011 | -0.126 | 0.133 |
| BXD03 | -0.761 | 0.092 |
| BXD04 | -0.518 | -0.386 |
| BXD05 | -0.499 | -0.014 |
| BXD06 | -0.007 | -0.305 |
| BXD07 | -0.768 | -0.828 |
| BXD08 | -0.365 | -0.185 |
| BXD09 | -0.089 | -0.375 |
| CAST | -0.145 | 0.24 |
| CCcont | -0.303 | -0.636 |
| DS01 | -0.115 | 0.52 |
| DS02 | 0.805 | 0.581 |
| DS04 | 1.072 | 0.356 |
| DS0c | 0.041 | 0.63 |
| GP01 | -1.345 | -1.518 |
| GP02 | -0.852 | -0.406 |
| GP0c | -0.191 | -1.971 |
| NOD | -0.153 | 0.099 |
| NZO | -0.967 | 0.144 |
| PWK | 0.161 | -0.05 |
| H37Rv_KO_CtpC | 0.229 | -0.644 |
| H37Rv_KO_CtpD | -0.567 | -1.357 |
| H37Rv_KO_Rv1272 | -0.59 | -0.287 |
| H37Rv_KO_SugABC | 0.65 | -0.264 |
| H37Rv_KO_MbtN | -0.476 | -1.728 |
| Trans05 | -0.663 | -0.481 |
| macrophage_unactivated | -0.439 | -0.578 |
| IL1 | 0.193 | 0.101 |
| Rapamycin | 0.47 | -0.681 |
| Tcell | 0.166 | -1.049 |
| GMCSF | -0.119 | -0.483 |
| IFNab | 0.0 | -0.846 |
| IFNg | 0.174 | -0.326 |
| IFNg_GMCSF1 | 0.0 | -0.154 |
| Rv1432_day32 | 0.648 | 0.562 |
| Rv1565c_day32 | -0.093 | 0.088 |
| secA2_input | 0.775 | 0.42 |
| delta_Rv3594 | -0.786 | -1.623 |
| delta_Rv3717 | -0.122 | -0.853 |
| delta_Rv3811 | -0.348 | -0.355 |
| delta_Rv0954 | -0.053 | -1.072 |
| PonA1 | -0.518 | -0.479 |
| EccD1_KO | 0.589 | 0.674 |
| EspI_KO | 0.511 | 1.352 |
| PE35_KO | 0.405 | 1.21 |
| PPE68_KO | 0.614 | 1.03 |
| glycerol2 | -0.021 | -0.151 |
| lignocerate | -0.074 | -0.574 |
| oleate | -0.176 | 0.349 |
| phosphatidylcholine | -0.053 | -0.021 |
| acetate | -0.554 | -0.331 |
| glucAc | -0.136 | -1.08 |
| Rv0950ko | 0.944 | -0.905 |
| Rv1096ko | -0.021 | -0.624 |
| Rv3684ko | 0.164 | -0.396 |
| delta_otsA_trehalose | -0.109 | -0.235 |