Top 10 genes with highest correlation to Rv2537c/aroD:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0526/- | (cc=0.5669) | info on Rv0526/- |
| Rv1414/- | (cc=0.5523) | info on Rv1414/- |
| Rv0078/- | (cc=0.5463) | info on Rv0078/- |
| Rv3398c/idsA1 | (cc=0.5329) | info on Rv3398c/idsA1 |
| Rv1946c/lppG | (cc=0.5055) | info on Rv1946c/lppG |
| Rv1506c/- | (cc=0.502) | info on Rv1506c/- |
| Rv1752/- | (cc=0.4959) | info on Rv1752/- |
| Rv1507c/- | (cc=0.4958) | info on Rv1507c/- |
| Rv0724/sppA | (cc=0.4953) | info on Rv0724/sppA |
| Rv2169c/- | (cc=0.4915) | info on Rv2169c/- |
Correlation of Rv2537c/aroD with Rv2169c/-
Normalized LFCs for Rv2537c/aroD:
(description and provenance of datasets)
| Rv2537c/aroD | Rv2169c/- | |
| Fe_supp_jason_reseq | 1.148 | 0.923 |
| low_pH_jason_reseq | -1.29 | 0.0 |
| NO_jason_reseq | 0.0 | 0.0 |
| B6_jason_reseq | -1.704 | 0.0 |
| MHCII_jason_reseq | -1.501 | 0.135 |
| Isoniazid02 | -0.167 | -0.796 |
| Rifampicin4 | -0.311 | -2.134 |
| Ethambutol3 | -0.14 | -0.958 |
| Meropenem3 | -0.138 | -1.109 |
| Vancomycin16 | 0.0 | -2.457 |
| Rv2680_day32 | 0.0 | 0.0 |
| H37Rv_KO_MarP | -1.662 | -0.288 |
| hypoxia_3wks | 0.459 | -0.502 |
| hypoxia_6wks | 0.464 | -0.549 |
| glycerol | -0.385 | 0.0 |
| cholesterol | -0.276 | 0.0 |
| AJ | 0.193 | 0.0 |
| Bibs02 | -0.348 | 0.0 |
| Bibs02c | -0.399 | 0.0 |
| BL6 | -0.238 | 0.0 |
| BL6a | 0.595 | 0.0 |
| BXD01 | 0.695 | 0.358 |
| BXD010 | 0.0 | 0.0 |
| BXD011 | 0.0 | 0.0 |
| BXD03 | 0.856 | 0.0 |
| BXD04 | 0.524 | 0.0 |
| BXD05 | -0.123 | 0.0 |
| BXD06 | 0.566 | 0.0 |
| BXD07 | 0.809 | 0.138 |
| BXD08 | 1.127 | 0.0 |
| BXD09 | 0.675 | 0.14 |
| CAST | -0.439 | 0.0 |
| CCcont | -0.285 | 0.149 |
| DS01 | -0.45 | 0.236 |
| DS02 | -0.414 | 0.0 |
| DS04 | 0.0 | 0.0 |
| DS0c | -0.413 | 0.217 |
| GP01 | -0.188 | 0.0 |
| GP02 | -0.159 | 0.0 |
| GP0c | -0.248 | 0.0 |
| NOD | -0.428 | 0.225 |
| NZO | -0.38 | 0.0 |
| PWK | -0.374 | 0.0 |
| H37Rv_KO_CtpC | 0.0 | 0.0 |
| H37Rv_KO_CtpD | 1.56 | 0.0 |
| H37Rv_KO_Rv1272 | -0.269 | 0.0 |
| H37Rv_KO_SugABC | 3.352 | 0.0 |
| H37Rv_KO_MbtN | -0.094 | 0.0 |
| Trans05 | 0.698 | 0.0 |
| macrophage_unactivated | 0.0 | 0.0 |
| IL1 | 0.0 | 0.0 |
| Rapamycin | 1.068 | 0.0 |
| Tcell | 0.209 | 0.45 |
| GMCSF | -0.177 | 0.0 |
| IFNab | 0.0 | 0.795 |
| IFNg | -0.369 | 0.0 |
| IFNg_GMCSF1 | 0.0 | 0.0 |
| Rv1432_day32 | -1.55 | 0.0 |
| Rv1565c_day32 | 0.0 | 0.0 |
| secA2_input | 0.628 | -1.832 |
| delta_Rv3594 | -1.071 | 0.119 |
| delta_Rv3717 | 0.378 | -1.067 |
| delta_Rv3811 | -0.564 | -0.122 |
| delta_Rv0954 | -0.398 | -1.096 |
| PonA1 | -1.154 | 0.0 |
| EccD1_KO | 1.23 | 0.454 |
| EspI_KO | 1.298 | 1.668 |
| PE35_KO | 0.971 | 3.856 |
| PPE68_KO | 0.486 | 3.2 |
| glycerol2 | -2.27 | -6.0 |
| lignocerate | -2.59 | -3.238 |
| oleate | -0.997 | -6.0 |
| phosphatidylcholine | -1.804 | -4.014 |
| acetate | -2.003 | -1.699 |
| glucAc | -3.156 | -2.833 |
| Rv0950ko | 0.247 | -1.701 |
| Rv1096ko | 0.0 | -2.31 |
| Rv3684ko | -0.593 | -0.75 |
| delta_otsA_trehalose | 0.544 | 0.27 |