Top 10 genes with highest correlation to Rv2525c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1698/mctB | (cc=0.7065) | info on Rv1698/mctB |
| Rv3717/- | (cc=0.6795) | info on Rv3717/- |
| Rv0999/- | (cc=0.646) | info on Rv0999/- |
| Rv0111/- | (cc=0.5914) | info on Rv0111/- |
| Rv0994/moeA1 | (cc=0.5823) | info on Rv0994/moeA1 |
| Rv3139/fadE24 | (cc=0.5808) | info on Rv3139/fadE24 |
| Rv1220c/- | (cc=0.5632) | info on Rv1220c/- |
| Rv3811/- | (cc=0.5625) | info on Rv3811/- |
| Rv1433/- | (cc=0.5557) | info on Rv1433/- |
| Rv0436c/pssA | (cc=0.5529) | info on Rv0436c/pssA |
Correlation of Rv2525c/- with Rv1698/mctB
Normalized LFCs for Rv2525c/-:
(description and provenance of datasets)
| Rv2525c/- | Rv1698/mctB | |
| Fe_supp_jason_reseq | 0.016 | -0.325 |
| low_pH_jason_reseq | -1.698 | -2.212 |
| NO_jason_reseq | -0.362 | -1.935 |
| B6_jason_reseq | -1.161 | -1.606 |
| MHCII_jason_reseq | -0.859 | -0.8 |
| Isoniazid02 | 0.771 | 1.136 |
| Rifampicin4 | -6.0 | -4.172 |
| Ethambutol3 | -0.255 | -0.365 |
| Meropenem3 | -3.837 | -1.557 |
| Vancomycin16 | -3.658 | -3.449 |
| Rv2680_day32 | -1.177 | -0.512 |
| H37Rv_KO_MarP | -0.412 | -0.43 |
| hypoxia_3wks | -0.498 | -1.156 |
| hypoxia_6wks | -0.424 | -2.497 |
| glycerol | -0.405 | 0.0 |
| cholesterol | 0.509 | 1.784 |
| AJ | -1.044 | -0.393 |
| Bibs02 | 0.301 | 0.574 |
| Bibs02c | 0.086 | -1.117 |
| BL6 | -0.258 | -0.467 |
| BL6a | -0.247 | -1.058 |
| BXD01 | -1.396 | -0.695 |
| BXD010 | -0.272 | -0.684 |
| BXD011 | -0.658 | 0.127 |
| BXD03 | -0.241 | -0.407 |
| BXD04 | -0.461 | 0.0 |
| BXD05 | -0.366 | -0.605 |
| BXD06 | -0.428 | -0.226 |
| BXD07 | -0.41 | -0.323 |
| BXD08 | -0.462 | 0.0 |
| BXD09 | 0.083 | -0.155 |
| CAST | -1.245 | -0.537 |
| CCcont | 0.246 | 1.3 |
| DS01 | 0.077 | 0.45 |
| DS02 | -0.258 | 0.11 |
| DS04 | -1.033 | -1.211 |
| DS0c | 0.347 | 0.762 |
| GP01 | 0.774 | 0.966 |
| GP02 | -0.251 | 0.743 |
| GP0c | 0.864 | 1.161 |
| NOD | 0.862 | -1.01 |
| NZO | -0.799 | -1.246 |
| PWK | -1.707 | -1.047 |
| H37Rv_KO_CtpC | 0.368 | 1.045 |
| H37Rv_KO_CtpD | -0.561 | -0.215 |
| H37Rv_KO_Rv1272 | -1.197 | -0.634 |
| H37Rv_KO_SugABC | -0.257 | -0.619 |
| H37Rv_KO_MbtN | -0.977 | 0.0 |
| Trans05 | -0.339 | 0.459 |
| macrophage_unactivated | 0.597 | 1.31 |
| IL1 | 0.917 | -0.955 |
| Rapamycin | 0.169 | 0.807 |
| Tcell | 0.469 | 0.0 |
| GMCSF | 0.222 | -0.401 |
| IFNab | 0.423 | 0.417 |
| IFNg | 0.107 | 0.369 |
| IFNg_GMCSF1 | -0.047 | 0.148 |
| Rv1432_day32 | -1.24 | -1.358 |
| Rv1565c_day32 | -1.178 | -0.809 |
| secA2_input | 0.712 | 0.64 |
| delta_Rv3594 | -0.574 | -0.577 |
| delta_Rv3717 | -0.019 | -0.904 |
| delta_Rv3811 | -1.114 | -0.842 |
| delta_Rv0954 | -0.283 | -1.101 |
| PonA1 | 0.275 | -1.066 |
| EccD1_KO | -0.483 | -0.286 |
| EspI_KO | -0.433 | -1.435 |
| PE35_KO | -1.044 | 0.394 |
| PPE68_KO | -0.822 | -0.093 |
| glycerol2 | -0.174 | 0.52 |
| lignocerate | -0.486 | -1.101 |
| oleate | -0.537 | -1.154 |
| phosphatidylcholine | -0.391 | -0.653 |
| acetate | 0.166 | 0.042 |
| glucAc | -0.211 | -0.934 |
| Rv0950ko | 0.588 | 0.669 |
| Rv1096ko | 1.013 | 0.929 |
| Rv3684ko | 0.508 | -0.727 |
| delta_otsA_trehalose | -0.259 | 0.232 |