Top 10 genes with highest correlation to Rv2521/bcp:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1124/ephC | (cc=0.4343) | info on Rv1124/ephC |
| Rv2316/uspA | (cc=0.4299) | info on Rv2316/uspA |
| Rv0210/- | (cc=0.4278) | info on Rv0210/- |
| Rv1641/infC | (cc=0.406) | info on Rv1641/infC |
| Rv0691A/- | (cc=0.3992) | info on Rv0691A/- |
| Rv1696/recN | (cc=0.3942) | info on Rv1696/recN |
| Rv3224A/- | (cc=0.3859) | info on Rv3224A/- |
| Rv0670/end | (cc=0.3835) | info on Rv0670/end |
| Rv3013/- | (cc=0.3803) | info on Rv3013/- |
| Rv3703c/- | (cc=0.3784) | info on Rv3703c/- |
Correlation of Rv2521/bcp with Rv1124/ephC
Normalized LFCs for Rv2521/bcp:
(description and provenance of datasets)
| Rv2521/bcp | Rv1124/ephC | |
| Fe_supp_jason_reseq | -0.583 | -0.403 |
| low_pH_jason_reseq | -0.398 | -0.276 |
| NO_jason_reseq | 0.614 | -0.053 |
| B6_jason_reseq | 0.185 | 0.773 |
| MHCII_jason_reseq | -0.108 | 0.494 |
| Isoniazid02 | 0.313 | 2.046 |
| Rifampicin4 | -0.55 | 0.466 |
| Ethambutol3 | 0.337 | 0.134 |
| Meropenem3 | -0.364 | -0.056 |
| Vancomycin16 | 0.523 | 1.008 |
| Rv2680_day32 | 0.845 | 0.844 |
| H37Rv_KO_MarP | 0.488 | 0.042 |
| hypoxia_3wks | -0.674 | 0.0 |
| hypoxia_6wks | 0.388 | -0.042 |
| glycerol | -0.35 | -0.903 |
| cholesterol | 0.021 | 0.488 |
| AJ | 0.469 | 0.321 |
| Bibs02 | -0.842 | 0.121 |
| Bibs02c | -0.871 | -0.661 |
| BL6 | -0.305 | -0.167 |
| BL6a | -0.436 | -1.263 |
| BXD01 | -0.469 | 0.428 |
| BXD010 | 0.496 | 0.681 |
| BXD011 | -0.143 | -1.076 |
| BXD03 | 0.058 | -0.806 |
| BXD04 | -0.125 | -0.553 |
| BXD05 | 0.486 | -1.4 |
| BXD06 | -0.101 | -0.62 |
| BXD07 | -0.597 | -0.643 |
| BXD08 | -0.332 | -0.69 |
| BXD09 | -0.36 | -0.381 |
| CAST | -0.113 | -0.219 |
| CCcont | -0.528 | -0.219 |
| DS01 | -0.253 | 1.829 |
| DS02 | -0.739 | 0.167 |
| DS04 | -1.061 | 0.022 |
| DS0c | -0.903 | -0.075 |
| GP01 | 0.279 | 0.146 |
| GP02 | 1.562 | 1.129 |
| GP0c | 0.391 | 0.086 |
| NOD | -0.067 | 1.328 |
| NZO | 0.246 | -0.069 |
| PWK | -0.467 | 0.422 |
| H37Rv_KO_CtpC | -1.24 | -0.617 |
| H37Rv_KO_CtpD | 1.085 | 0.732 |
| H37Rv_KO_Rv1272 | -0.221 | -0.049 |
| H37Rv_KO_SugABC | 0.301 | 0.24 |
| H37Rv_KO_MbtN | -1.62 | -1.758 |
| Trans05 | -1.273 | -0.174 |
| macrophage_unactivated | 0.606 | 0.164 |
| IL1 | -0.027 | -0.626 |
| Rapamycin | 0.304 | -0.522 |
| Tcell | -0.228 | -0.362 |
| GMCSF | 0.066 | 0.686 |
| IFNab | 0.487 | -0.958 |
| IFNg | 0.2 | -0.195 |
| IFNg_GMCSF1 | -0.481 | -0.534 |
| Rv1432_day32 | 0.0 | 0.485 |
| Rv1565c_day32 | 0.169 | 1.205 |
| secA2_input | -0.451 | 0.108 |
| delta_Rv3594 | 1.219 | 0.199 |
| delta_Rv3717 | 0.63 | 1.572 |
| delta_Rv3811 | -0.018 | 1.663 |
| delta_Rv0954 | -0.505 | 0.068 |
| PonA1 | 1.03 | 1.23 |
| EccD1_KO | -0.276 | -0.365 |
| EspI_KO | -0.471 | 0.294 |
| PE35_KO | -0.245 | -0.324 |
| PPE68_KO | -0.739 | 0.083 |
| glycerol2 | 0.935 | 0.345 |
| lignocerate | 0.605 | 0.614 |
| oleate | -0.612 | 0.485 |
| phosphatidylcholine | 0.368 | 0.364 |
| acetate | -0.116 | -0.203 |
| glucAc | 0.656 | 0.953 |
| Rv0950ko | 0.724 | -0.072 |
| Rv1096ko | 0.585 | 0.0 |
| Rv3684ko | 1.055 | 0.727 |
| delta_otsA_trehalose | -0.711 | -1.61 |