Top 10 genes with highest correlation to Rv2514c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0908/ctpE | (cc=0.5109) | info on Rv0908/ctpE |
| Rv3428c/- | (cc=0.4208) | info on Rv3428c/- |
| Rv2318/uspC | (cc=0.4034) | info on Rv2318/uspC |
| Rv1728c/- | (cc=0.3909) | info on Rv1728c/- |
| Rv2853/PE_PGRS48 | (cc=0.3819) | info on Rv2853/PE_PGRS48 |
| Rv1469/ctpD | (cc=0.3815) | info on Rv1469/ctpD |
| Rv1377c/- | (cc=0.3761) | info on Rv1377c/- |
| Rv1772/- | (cc=0.3741) | info on Rv1772/- |
| Rv0253/nirD | (cc=0.3727) | info on Rv0253/nirD |
| Rv3912/- | (cc=0.3671) | info on Rv3912/- |
Correlation of Rv2514c/- with Rv2853/PE_PGRS48
Normalized LFCs for Rv2514c/-:
(description and provenance of datasets)
| Rv2514c/- | Rv2853/PE_PGRS48 | |
| Fe_supp_jason_reseq | -0.766 | 0.641 |
| low_pH_jason_reseq | -0.567 | -0.269 |
| NO_jason_reseq | -1.126 | 0.06 |
| B6_jason_reseq | -1.953 | -0.414 |
| MHCII_jason_reseq | -2.841 | -0.425 |
| Isoniazid02 | 0.1 | -0.965 |
| Rifampicin4 | -0.097 | 0.095 |
| Ethambutol3 | -0.49 | 0.258 |
| Meropenem3 | -0.201 | -1.22 |
| Vancomycin16 | -0.096 | -0.788 |
| Rv2680_day32 | -0.518 | -0.666 |
| H37Rv_KO_MarP | 0.931 | -0.206 |
| hypoxia_3wks | -0.989 | -0.335 |
| hypoxia_6wks | -1.384 | -0.72 |
| glycerol | 0.465 | 0.587 |
| cholesterol | -0.751 | 0.29 |
| AJ | 0.698 | 0.881 |
| Bibs02 | -0.616 | 0.199 |
| Bibs02c | -0.199 | 0.273 |
| BL6 | -0.058 | 0.488 |
| BL6a | -0.667 | 0.462 |
| BXD01 | 0.058 | 0.269 |
| BXD010 | 0.094 | 0.324 |
| BXD011 | 0.093 | 0.519 |
| BXD03 | 0.099 | 0.679 |
| BXD04 | -0.581 | 0.39 |
| BXD05 | -0.767 | 0.242 |
| BXD06 | -0.219 | 0.507 |
| BXD07 | -0.826 | 0.494 |
| BXD08 | -1.205 | 0.497 |
| BXD09 | -0.876 | 0.213 |
| CAST | -0.257 | 0.475 |
| CCcont | -0.272 | 0.574 |
| DS01 | -1.167 | 0.24 |
| DS02 | -0.318 | -0.408 |
| DS04 | -1.055 | 0.623 |
| DS0c | -0.776 | 0.0 |
| GP01 | 0.808 | -0.129 |
| GP02 | -0.955 | 0.108 |
| GP0c | -0.284 | -0.182 |
| NOD | 3.419 | 0.61 |
| NZO | 0.666 | 0.344 |
| PWK | 0.475 | 0.078 |
| H37Rv_KO_CtpC | -0.101 | 0.235 |
| H37Rv_KO_CtpD | -1.64 | 0.174 |
| H37Rv_KO_Rv1272 | -0.206 | 0.811 |
| H37Rv_KO_SugABC | 0.228 | -0.084 |
| H37Rv_KO_MbtN | 0.699 | 0.659 |
| Trans05 | 1.174 | 1.389 |
| macrophage_unactivated | -1.174 | -0.262 |
| IL1 | -0.409 | -0.196 |
| Rapamycin | -0.135 | -0.227 |
| Tcell | -0.45 | -0.381 |
| GMCSF | 0.539 | -0.404 |
| IFNab | -0.562 | -0.435 |
| IFNg | 0.115 | -0.043 |
| IFNg_GMCSF1 | -0.666 | -0.182 |
| Rv1432_day32 | 1.009 | -0.018 |
| Rv1565c_day32 | 0.637 | 1.512 |
| secA2_input | -1.821 | -0.747 |
| delta_Rv3594 | -0.757 | -0.017 |
| delta_Rv3717 | -0.427 | 0.169 |
| delta_Rv3811 | -0.143 | 0.271 |
| delta_Rv0954 | -0.224 | -0.42 |
| PonA1 | 1.057 | 0.667 |
| EccD1_KO | -0.684 | 0.0 |
| EspI_KO | -0.188 | 0.493 |
| PE35_KO | 0.123 | 0.175 |
| PPE68_KO | -0.285 | -0.134 |
| glycerol2 | -1.321 | -0.078 |
| lignocerate | -0.072 | 0.444 |
| oleate | -1.874 | -0.016 |
| phosphatidylcholine | 0.434 | 0.245 |
| acetate | 0.515 | 0.053 |
| glucAc | 1.202 | 0.15 |
| Rv0950ko | 2.081 | 0.283 |
| Rv1096ko | 1.276 | 0.654 |
| Rv3684ko | 2.26 | 0.845 |
| delta_otsA_trehalose | -0.751 | 0.127 |