Top 10 genes with highest correlation to Rv2462c/tig:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0049/- | (cc=0.573) | info on Rv0049/- |
| Rv1512/epiA | (cc=0.5683) | info on Rv1512/epiA |
| Rv3919c/gid | (cc=0.5394) | info on Rv3919c/gid |
| Rv3835/- | (cc=0.5241) | info on Rv3835/- |
| Rv0545c/pitA | (cc=0.5035) | info on Rv0545c/pitA |
| Rv1130/prpD | (cc=0.4907) | info on Rv1130/prpD |
| Rv3854c/ethA | (cc=0.4813) | info on Rv3854c/ethA |
| Rv1337/- | (cc=0.4729) | info on Rv1337/- |
| Rv0123/- | (cc=0.4645) | info on Rv0123/- |
| Rv2213/pepB | (cc=0.4632) | info on Rv2213/pepB |
Correlation of Rv2462c/tig with Rv3835/-
Normalized LFCs for Rv2462c/tig:
(description and provenance of datasets)
| Rv2462c/tig | Rv3835/- | |
| Fe_supp_jason_reseq | -0.257 | 0.175 |
| low_pH_jason_reseq | -2.423 | -1.077 |
| NO_jason_reseq | -1.964 | -0.512 |
| B6_jason_reseq | -0.958 | -1.291 |
| MHCII_jason_reseq | -1.57 | -0.659 |
| Isoniazid02 | -1.573 | 0.425 |
| Rifampicin4 | -1.462 | 1.107 |
| Ethambutol3 | 0.643 | 2.612 |
| Meropenem3 | -2.059 | 0.942 |
| Vancomycin16 | -0.499 | 0.0 |
| Rv2680_day32 | -1.318 | -1.024 |
| H37Rv_KO_MarP | -1.912 | -1.139 |
| hypoxia_3wks | -0.57 | -0.255 |
| hypoxia_6wks | 0.138 | 0.566 |
| glycerol | 2.124 | -0.222 |
| cholesterol | -0.585 | 0.773 |
| AJ | -0.745 | -0.983 |
| Bibs02 | -2.064 | -0.31 |
| Bibs02c | -1.173 | -0.887 |
| BL6 | 0.648 | 1.392 |
| BL6a | 0.634 | 0.228 |
| BXD01 | -0.317 | 1.394 |
| BXD010 | 1.319 | 1.425 |
| BXD011 | 0.497 | 1.952 |
| BXD03 | 1.613 | 2.034 |
| BXD04 | 0.323 | 1.954 |
| BXD05 | 0.791 | 0.852 |
| BXD06 | 1.345 | 1.85 |
| BXD07 | 0.683 | 1.614 |
| BXD08 | -0.109 | 1.519 |
| BXD09 | 0.761 | 1.224 |
| CAST | 0.175 | 0.439 |
| CCcont | 1.351 | 1.345 |
| DS01 | -2.957 | -0.45 |
| DS02 | -2.105 | 1.271 |
| DS04 | -0.899 | -0.034 |
| DS0c | -2.577 | -0.506 |
| GP01 | 0.075 | 0.43 |
| GP02 | 0.078 | 0.617 |
| GP0c | 0.298 | 0.267 |
| NOD | 0.0 | 0.428 |
| NZO | -0.25 | 0.493 |
| PWK | 1.218 | 0.665 |
| H37Rv_KO_CtpC | 0.0 | 0.467 |
| H37Rv_KO_CtpD | 0.442 | 0.26 |
| H37Rv_KO_Rv1272 | 0.368 | -0.102 |
| H37Rv_KO_SugABC | 0.756 | 2.433 |
| H37Rv_KO_MbtN | 3.253 | 2.451 |
| Trans05 | 0.661 | 1.423 |
| macrophage_unactivated | -0.694 | 0.066 |
| IL1 | -2.05 | -0.03 |
| Rapamycin | -1.537 | -0.924 |
| Tcell | -1.023 | -1.61 |
| GMCSF | 0.0 | 0.267 |
| IFNab | 1.542 | 1.134 |
| IFNg | 0.163 | 0.569 |
| IFNg_GMCSF1 | 1.427 | 0.971 |
| Rv1432_day32 | -1.082 | -0.541 |
| Rv1565c_day32 | 0.152 | -1.579 |
| secA2_input | 2.192 | 0.571 |
| delta_Rv3594 | 2.923 | 0.086 |
| delta_Rv3717 | 3.498 | 0.964 |
| delta_Rv3811 | 2.692 | 0.807 |
| delta_Rv0954 | 1.972 | 0.234 |
| PonA1 | -0.927 | -0.398 |
| EccD1_KO | -0.072 | -0.109 |
| EspI_KO | -1.469 | -0.068 |
| PE35_KO | -0.099 | -1.155 |
| PPE68_KO | -0.854 | -0.634 |
| glycerol2 | 0.661 | 0.737 |
| lignocerate | -0.603 | 0.377 |
| oleate | -1.001 | 0.081 |
| phosphatidylcholine | -0.604 | -0.353 |
| acetate | -0.331 | 1.127 |
| glucAc | -0.049 | 0.91 |
| Rv0950ko | -0.286 | -0.202 |
| Rv1096ko | -0.069 | 0.431 |
| Rv3684ko | 1.444 | 0.891 |
| delta_otsA_trehalose | -0.522 | -0.228 |