Top 10 genes with highest correlation to Rv2433c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2333c/stp | (cc=0.4613) | info on Rv2333c/stp |
| Rv1681/moeX | (cc=0.4372) | info on Rv1681/moeX |
| Rv1697/- | (cc=0.4228) | info on Rv1697/- |
| Rv0026/- | (cc=0.4145) | info on Rv0026/- |
| Rv2983/- | (cc=0.409) | info on Rv2983/- |
| Rv2847c/cysG | (cc=0.3943) | info on Rv2847c/cysG |
| Rv0526/- | (cc=0.3879) | info on Rv0526/- |
| Rv1785c/cyp143 | (cc=0.3793) | info on Rv1785c/cyp143 |
| Rv1552/frdA | (cc=0.3775) | info on Rv1552/frdA |
| Rv3455c/truA | (cc=0.3774) | info on Rv3455c/truA |
Correlation of Rv2433c/- with Rv1552/frdA
Normalized LFCs for Rv2433c/-:
(description and provenance of datasets)
| Rv2433c/- | Rv1552/frdA | |
| Fe_supp_jason_reseq | -0.38 | -0.283 |
| low_pH_jason_reseq | 1.673 | 0.679 |
| NO_jason_reseq | 0.788 | 0.097 |
| B6_jason_reseq | -0.814 | -0.246 |
| MHCII_jason_reseq | -0.819 | -0.375 |
| Isoniazid02 | 3.726 | 1.394 |
| Rifampicin4 | -0.325 | 0.057 |
| Ethambutol3 | 2.454 | 1.083 |
| Meropenem3 | -0.261 | -0.103 |
| Vancomycin16 | -0.361 | 0.162 |
| Rv2680_day32 | -0.119 | 0.071 |
| H37Rv_KO_MarP | -0.542 | 0.275 |
| hypoxia_3wks | -0.076 | 0.638 |
| hypoxia_6wks | -1.125 | 0.255 |
| glycerol | -1.26 | 0.0 |
| cholesterol | -0.43 | 0.219 |
| AJ | -0.956 | 1.106 |
| Bibs02 | 1.489 | 0.474 |
| Bibs02c | 0.561 | 0.196 |
| BL6 | 1.241 | 0.225 |
| BL6a | -1.708 | 0.244 |
| BXD01 | -0.99 | 0.252 |
| BXD010 | -0.745 | 0.379 |
| BXD011 | 0.376 | 0.229 |
| BXD03 | 0.016 | -0.349 |
| BXD04 | -0.386 | -0.345 |
| BXD05 | 1.347 | 0.106 |
| BXD06 | 0.321 | -0.067 |
| BXD07 | -0.389 | 0.526 |
| BXD08 | -0.395 | 0.239 |
| BXD09 | -0.193 | 0.252 |
| CAST | 0.157 | 0.0 |
| CCcont | 0.15 | 0.048 |
| DS01 | -0.737 | -0.2 |
| DS02 | -2.187 | -0.852 |
| DS04 | 0.639 | -0.032 |
| DS0c | -0.025 | -0.427 |
| GP01 | -1.708 | 0.577 |
| GP02 | -0.071 | 0.216 |
| GP0c | 0.596 | 0.369 |
| NOD | 0.153 | 1.185 |
| NZO | -0.787 | 0.889 |
| PWK | -1.444 | 0.405 |
| H37Rv_KO_CtpC | 0.683 | 0.824 |
| H37Rv_KO_CtpD | 1.045 | 1.188 |
| H37Rv_KO_Rv1272 | -1.462 | 1.044 |
| H37Rv_KO_SugABC | -0.357 | 0.293 |
| H37Rv_KO_MbtN | -1.068 | 0.491 |
| Trans05 | -0.234 | 0.701 |
| macrophage_unactivated | -1.67 | 0.268 |
| IL1 | 0.575 | 0.605 |
| Rapamycin | -0.267 | 0.196 |
| Tcell | -1.724 | 0.538 |
| GMCSF | 0.766 | -0.058 |
| IFNab | -0.744 | -0.417 |
| IFNg | 0.711 | -0.305 |
| IFNg_GMCSF1 | -1.295 | 0.267 |
| Rv1432_day32 | -0.248 | 0.121 |
| Rv1565c_day32 | -0.697 | 0.065 |
| secA2_input | -0.189 | -0.269 |
| delta_Rv3594 | -0.473 | 0.358 |
| delta_Rv3717 | -1.067 | -0.138 |
| delta_Rv3811 | -0.709 | 0.402 |
| delta_Rv0954 | -0.541 | 0.326 |
| PonA1 | -0.013 | -0.353 |
| EccD1_KO | 0.059 | 0.122 |
| EspI_KO | 1.158 | 0.787 |
| PE35_KO | 0.204 | 0.939 |
| PPE68_KO | 0.278 | 1.078 |
| glycerol2 | -2.308 | 0.0 |
| lignocerate | -1.872 | -0.069 |
| oleate | -1.9 | 0.2 |
| phosphatidylcholine | -1.487 | 0.126 |
| acetate | -1.139 | 0.03 |
| glucAc | -2.327 | 0.128 |
| Rv0950ko | -0.19 | -0.326 |
| Rv1096ko | -0.908 | -0.73 |
| Rv3684ko | -1.978 | -1.343 |
| delta_otsA_trehalose | -0.522 | 0.031 |