Top 10 genes with highest correlation to Rv2395/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3757c/proW | (cc=0.55) | info on Rv3757c/proW |
| Rv0724A/- | (cc=0.5203) | info on Rv0724A/- |
| Rv1074c/fadA3 | (cc=0.5199) | info on Rv1074c/fadA3 |
| Rv0276/- | (cc=0.4863) | info on Rv0276/- |
| Rv0560c/- | (cc=0.4709) | info on Rv0560c/- |
| Rv1028c/kdpD | (cc=0.4699) | info on Rv1028c/kdpD |
| Rv1880c/cyp140 | (cc=0.4697) | info on Rv1880c/cyp140 |
| Rv2007c/fdxA | (cc=0.4675) | info on Rv2007c/fdxA |
| Rv0969/ctpV | (cc=0.4647) | info on Rv0969/ctpV |
| Rv3704c/gshA | (cc=0.4605) | info on Rv3704c/gshA |
Correlation of Rv2395/- with Rv3757c/proW
Normalized LFCs for Rv2395/-:
(description and provenance of datasets)
| Rv2395/- | Rv3757c/proW | |
| Fe_supp_jason_reseq | -0.474 | -0.175 |
| low_pH_jason_reseq | -0.663 | -0.385 |
| NO_jason_reseq | 0.137 | 0.123 |
| B6_jason_reseq | -0.222 | 0.013 |
| MHCII_jason_reseq | -0.09 | 0.09 |
| Isoniazid02 | 0.975 | 2.615 |
| Rifampicin4 | -0.127 | 0.146 |
| Ethambutol3 | -0.026 | 2.071 |
| Meropenem3 | -0.025 | 0.0 |
| Vancomycin16 | -0.18 | 0.143 |
| Rv2680_day32 | -0.175 | -0.225 |
| H37Rv_KO_MarP | 0.186 | 0.581 |
| hypoxia_3wks | 0.0 | 0.431 |
| hypoxia_6wks | -0.048 | 0.599 |
| glycerol | -0.43 | -0.698 |
| cholesterol | 0.014 | -0.378 |
| AJ | 0.207 | -0.424 |
| Bibs02 | 0.005 | 0.103 |
| Bibs02c | 0.15 | -1.031 |
| BL6 | -0.177 | -0.593 |
| BL6a | -0.208 | -1.187 |
| BXD01 | -0.095 | -0.34 |
| BXD010 | -0.248 | -0.1 |
| BXD011 | -0.042 | -0.915 |
| BXD03 | -0.109 | -1.79 |
| BXD04 | -0.165 | -0.874 |
| BXD05 | 0.108 | -0.454 |
| BXD06 | -0.14 | -0.121 |
| BXD07 | -0.368 | -1.06 |
| BXD08 | 0.066 | -0.163 |
| BXD09 | -0.345 | -0.409 |
| CAST | 0.312 | -0.165 |
| CCcont | -0.526 | -0.722 |
| DS01 | -0.053 | -0.111 |
| DS02 | 0.049 | -0.117 |
| DS04 | -0.142 | -0.176 |
| DS0c | 0.262 | -0.352 |
| GP01 | -0.516 | -0.504 |
| GP02 | -0.297 | -1.794 |
| GP0c | -0.667 | -1.253 |
| NOD | 0.373 | 0.939 |
| NZO | -0.139 | -0.909 |
| PWK | 0.482 | 0.362 |
| H37Rv_KO_CtpC | -0.297 | -0.365 |
| H37Rv_KO_CtpD | 0.568 | 0.234 |
| H37Rv_KO_Rv1272 | 0.314 | 0.453 |
| H37Rv_KO_SugABC | -0.177 | -0.544 |
| H37Rv_KO_MbtN | 0.033 | 0.573 |
| Trans05 | -0.228 | 0.303 |
| macrophage_unactivated | 0.372 | 0.259 |
| IL1 | 0.237 | -0.35 |
| Rapamycin | 0.107 | -0.178 |
| Tcell | 0.277 | 0.482 |
| GMCSF | 0.586 | -0.393 |
| IFNab | -0.091 | -0.45 |
| IFNg | 0.358 | -0.703 |
| IFNg_GMCSF1 | 0.163 | 0.217 |
| Rv1432_day32 | 0.237 | 0.385 |
| Rv1565c_day32 | -0.062 | -1.125 |
| secA2_input | 0.265 | 0.632 |
| delta_Rv3594 | 0.187 | 0.525 |
| delta_Rv3717 | -0.031 | 0.765 |
| delta_Rv3811 | -0.064 | 0.199 |
| delta_Rv0954 | 0.623 | 1.381 |
| PonA1 | 0.479 | 0.412 |
| EccD1_KO | 0.543 | 0.467 |
| EspI_KO | -0.16 | 0.194 |
| PE35_KO | 0.158 | -0.178 |
| PPE68_KO | -0.179 | -1.03 |
| glycerol2 | 0.277 | -0.565 |
| lignocerate | 0.369 | -0.662 |
| oleate | 0.17 | -0.027 |
| phosphatidylcholine | 0.542 | -0.564 |
| acetate | -0.251 | -0.61 |
| glucAc | -0.006 | -0.771 |
| Rv0950ko | 1.182 | 0.036 |
| Rv1096ko | 0.648 | 1.037 |
| Rv3684ko | 0.403 | 0.665 |
| delta_otsA_trehalose | 1.511 | 1.725 |