TnSeqCorr

Top 10 genes with highest correlation to Rv2367c/-:

update plotcorrelationlink to info on gene
Rv2955c/- (cc=0.5117) info on Rv2955c/-
Rv2470/glbO (cc=0.4692) info on Rv2470/glbO
Rv2673/aftC (cc=0.4532) info on Rv2673/aftC
Rv2494/vapC38 (cc=0.4469) info on Rv2494/vapC38
Rv2557/- (cc=0.4405) info on Rv2557/-
Rv1869c/- (cc=0.4307) info on Rv1869c/-
Rv2041c/- (cc=0.4299) info on Rv2041c/-
Rv0333/- (cc=0.406) info on Rv0333/-
Rv2505c/fadD35 (cc=0.3956) info on Rv2505c/fadD35
Rv2270/lppN (cc=0.3939) info on Rv2270/lppN

Correlation of Rv2367c/- with Rv2955c/-

Normalized LFCs for Rv2367c/-:
(description and provenance of datasets)
Rv2367c/-Rv2955c/-
Fe_supp_jason_reseq

-1.653

-0.931

low_pH_jason_reseq

-0.311

0.649

NO_jason_reseq

-0.06

-0.026

B6_jason_reseq

-1.244

-0.206

MHCII_jason_reseq

-0.082

0.575

Isoniazid02

0.437

0.185

Rifampicin4

0.357

0.644

Ethambutol3

0.161

0.66

Meropenem3

1.198

2.825

Vancomycin16

0.419

0.162

Rv2680_day32

0.035

-0.117

H37Rv_KO_MarP

-0.131

-0.063

hypoxia_3wks

-0.379

0.251

hypoxia_6wks

0.72

0.0

glycerol

-0.616

0.87

cholesterol

0.211

0.101

AJ

0.78

0.511

Bibs02

0.303

0.576

Bibs02c

-0.103

-0.189

BL6

0.073

-0.258

BL6a

-0.227

-0.118

BXD01

-1.32

0.396

BXD010

-0.497

0.326

BXD011

-0.29

-0.417

BXD03

-0.573

-0.08

BXD04

-0.882

0.509

BXD05

-0.227

0.256

BXD06

0.314

-0.059

BXD07

-0.514

-0.071

BXD08

-0.516

0.541

BXD09

0.066

-0.01

CAST

-0.934

-0.102

CCcont

-0.092

-0.183

DS01

-0.501

-0.233

DS02

-1.043

0.454

DS04

-1.337

0.096

DS0c

-0.162

0.181

GP01

-0.727

-0.893

GP02

-1.472

0.041

GP0c

-0.439

-0.118

NOD

0.529

0.033

NZO

0.205

0.802

PWK

0.462

0.466

H37Rv_KO_CtpC

-0.47

0.091

H37Rv_KO_CtpD

-2.086

0.218

H37Rv_KO_Rv1272

-0.759

-1.094

H37Rv_KO_SugABC

0.28

0.441

H37Rv_KO_MbtN

-1.697

0.547

Trans05

0.149

0.473

macrophage_unactivated

-1.869

-0.877

IL1

0.255

0.107

Rapamycin

0.046

-0.169

Tcell

-0.453

-0.661

GMCSF

-0.541

-0.048

IFNab

-0.52

-0.52

IFNg

0.339

-0.072

IFNg_GMCSF1

-0.754

0.057

Rv1432_day32

1.175

0.9

Rv1565c_day32

-1.579

-1.208

secA2_input

-0.36

-0.099

delta_Rv3594

-0.402

-0.288

delta_Rv3717

-1.044

-0.677

delta_Rv3811

-0.772

-0.464

delta_Rv0954

-1.498

0.111

PonA1

0.504

-0.466

EccD1_KO

0.881

0.194

EspI_KO

0.992

1.027

PE35_KO

0.939

0.968

PPE68_KO

1.113

0.937

glycerol2

-1.192

-0.722

lignocerate

-1.238

-0.887

oleate

-1.252

-0.305

phosphatidylcholine

-1.864

-0.612

acetate

-0.444

-1.006

glucAc

-0.365

-0.933

Rv0950ko

0.256

-0.823

Rv1096ko

-0.715

-0.283

Rv3684ko

-1.127

-1.307

delta_otsA_trehalose

-0.245

-0.081