Top 10 genes with highest correlation to Rv2352c/PPE38:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0160c/PE4 | (cc=0.5845) | info on Rv0160c/PE4 |
| Rv3161c/- | (cc=0.5722) | info on Rv3161c/- |
| Rv0354c/PPE7 | (cc=0.5707) | info on Rv0354c/PPE7 |
| Rv1504c/- | (cc=0.5614) | info on Rv1504c/- |
| Rv2947c/pks15 | (cc=0.5506) | info on Rv2947c/pks15 |
| Rv1278/- | (cc=0.5437) | info on Rv1278/- |
| Rv3919c/gid | (cc=0.5421) | info on Rv3919c/gid |
| Rv0073/- | (cc=0.5416) | info on Rv0073/- |
| Rv0469/umaA | (cc=0.5381) | info on Rv0469/umaA |
| Rv2853/PE_PGRS48 | (cc=0.5372) | info on Rv2853/PE_PGRS48 |
Correlation of Rv2352c/PPE38 with Rv3919c/gid
Normalized LFCs for Rv2352c/PPE38:
(description and provenance of datasets)
| Rv2352c/PPE38 | Rv3919c/gid | |
| Fe_supp_jason_reseq | 0.35 | 1.249 |
| low_pH_jason_reseq | -1.029 | -0.241 |
| NO_jason_reseq | -0.491 | -0.312 |
| B6_jason_reseq | -0.488 | -1.479 |
| MHCII_jason_reseq | -0.46 | -2.338 |
| Isoniazid02 | -1.043 | -3.195 |
| Rifampicin4 | -0.208 | -0.872 |
| Ethambutol3 | -0.882 | -2.085 |
| Meropenem3 | -1.085 | -2.862 |
| Vancomycin16 | -0.602 | -2.258 |
| Rv2680_day32 | -0.611 | -0.161 |
| H37Rv_KO_MarP | -0.629 | -0.301 |
| hypoxia_3wks | -0.06 | -0.662 |
| hypoxia_6wks | -0.56 | -1.288 |
| glycerol | 0.532 | 1.877 |
| cholesterol | 0.575 | -0.105 |
| AJ | 0.321 | -0.346 |
| Bibs02 | 0.203 | -0.201 |
| Bibs02c | 0.297 | -0.399 |
| BL6 | 0.173 | 0.559 |
| BL6a | 0.425 | 1.099 |
| BXD01 | 0.346 | 1.094 |
| BXD010 | -0.031 | 0.629 |
| BXD011 | -0.232 | 1.147 |
| BXD03 | 0.503 | 0.091 |
| BXD04 | 0.661 | 0.124 |
| BXD05 | 0.358 | 1.021 |
| BXD06 | 0.167 | 0.597 |
| BXD07 | 0.22 | 1.163 |
| BXD08 | 0.298 | 0.71 |
| BXD09 | 0.376 | 0.563 |
| CAST | 0.235 | -0.537 |
| CCcont | -0.032 | 1.322 |
| DS01 | 0.267 | -0.551 |
| DS02 | 0.17 | -0.325 |
| DS04 | 0.554 | -0.141 |
| DS0c | 0.179 | -0.602 |
| GP01 | 0.253 | 0.396 |
| GP02 | 0.349 | -0.353 |
| GP0c | 0.348 | 1.838 |
| NOD | -0.184 | -1.072 |
| NZO | 0.393 | 0.199 |
| PWK | 0.06 | -0.544 |
| H37Rv_KO_CtpC | 0.169 | 0.688 |
| H37Rv_KO_CtpD | 0.659 | 0.729 |
| H37Rv_KO_Rv1272 | 1.248 | 1.619 |
| H37Rv_KO_SugABC | 0.005 | -0.148 |
| H37Rv_KO_MbtN | 0.457 | 2.194 |
| Trans05 | 1.088 | 1.847 |
| macrophage_unactivated | 0.511 | 0.167 |
| IL1 | -0.11 | -2.435 |
| Rapamycin | 0.037 | -1.712 |
| Tcell | -0.495 | -0.368 |
| GMCSF | 0.533 | 0.14 |
| IFNab | 0.054 | -0.432 |
| IFNg | 0.088 | -0.807 |
| IFNg_GMCSF1 | 0.364 | -0.742 |
| Rv1432_day32 | 0.407 | 0.55 |
| Rv1565c_day32 | -0.141 | -1.418 |
| secA2_input | -0.626 | 1.163 |
| delta_Rv3594 | 0.583 | 1.156 |
| delta_Rv3717 | -0.374 | 1.815 |
| delta_Rv3811 | 0.268 | 1.822 |
| delta_Rv0954 | 0.289 | -0.588 |
| PonA1 | 0.085 | -0.904 |
| EccD1_KO | -0.566 | 0.937 |
| EspI_KO | -0.031 | -0.174 |
| PE35_KO | 0.105 | -0.464 |
| PPE68_KO | 0.275 | 0.278 |
| glycerol2 | 0.167 | -1.267 |
| lignocerate | -0.169 | -2.056 |
| oleate | -0.004 | -1.891 |
| phosphatidylcholine | -0.224 | -2.255 |
| acetate | -0.047 | -0.663 |
| glucAc | 0.016 | -0.754 |
| Rv0950ko | 0.277 | 1.731 |
| Rv1096ko | -0.012 | 1.414 |
| Rv3684ko | -0.134 | 0.714 |
| delta_otsA_trehalose | 0.184 | 0.195 |