Top 10 genes with highest correlation to Rv2346c/esxO:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2401/- | (cc=0.5109) | info on Rv2401/- |
| Rv1047/- | (cc=0.4841) | info on Rv1047/- |
| Rv2512c/- | (cc=0.4726) | info on Rv2512c/- |
| Rv0467/icl1 | (cc=0.4513) | info on Rv0467/icl1 |
| Rv3023c/- | (cc=0.4421) | info on Rv3023c/- |
| Rv0011c/- | (cc=0.4344) | info on Rv0011c/- |
| Rv1199c/- | (cc=0.43) | info on Rv1199c/- |
| Rv3696c/glpK | (cc=0.4273) | info on Rv3696c/glpK |
| Rv3115/- | (cc=0.4229) | info on Rv3115/- |
| Rv2169c/- | (cc=0.421) | info on Rv2169c/- |
Correlation of Rv2346c/esxO with Rv2401/-
Normalized LFCs for Rv2346c/esxO:
(description and provenance of datasets)
| Rv2346c/esxO | Rv2401/- | |
| Fe_supp_jason_reseq | -0.95 | 1.001 |
| low_pH_jason_reseq | 0.785 | 1.261 |
| NO_jason_reseq | 1.134 | 2.079 |
| B6_jason_reseq | -0.611 | 2.108 |
| MHCII_jason_reseq | -0.983 | -2.11 |
| Isoniazid02 | -0.949 | -0.258 |
| Rifampicin4 | 0.341 | -0.742 |
| Ethambutol3 | -0.337 | -0.597 |
| Meropenem3 | 0.289 | -0.588 |
| Vancomycin16 | -0.868 | -0.554 |
| Rv2680_day32 | 0.538 | 0.995 |
| H37Rv_KO_MarP | 1.249 | 0.267 |
| hypoxia_3wks | 0.239 | -0.486 |
| hypoxia_6wks | -0.161 | 2.397 |
| glycerol | -0.341 | 0.341 |
| cholesterol | -1.17 | 0.454 |
| AJ | 1.089 | 0.392 |
| Bibs02 | 0.677 | 0.677 |
| Bibs02c | 0.741 | -0.355 |
| BL6 | -0.613 | -0.723 |
| BL6a | 0.0 | 0.29 |
| BXD01 | -0.6 | -0.347 |
| BXD010 | 0.57 | 0.543 |
| BXD011 | 0.294 | 0.583 |
| BXD03 | 0.699 | -0.229 |
| BXD04 | -0.01 | 0.627 |
| BXD05 | 0.155 | -0.405 |
| BXD06 | 0.102 | 0.068 |
| BXD07 | -0.453 | 1.803 |
| BXD08 | -0.303 | -0.225 |
| BXD09 | -0.044 | 1.39 |
| CAST | 1.315 | 1.952 |
| CCcont | -0.724 | 0.149 |
| DS01 | 0.009 | 2.452 |
| DS02 | 0.907 | 3.341 |
| DS04 | -0.129 | 0.645 |
| DS0c | 0.46 | 2.528 |
| GP01 | -1.287 | -1.012 |
| GP02 | -0.51 | 0.0 |
| GP0c | -1.502 | 0.357 |
| NOD | 0.342 | 0.059 |
| NZO | 0.76 | 0.423 |
| PWK | 0.968 | 1.368 |
| H37Rv_KO_CtpC | -0.54 | 0.082 |
| H37Rv_KO_CtpD | 1.228 | 1.059 |
| H37Rv_KO_Rv1272 | -0.674 | -0.95 |
| H37Rv_KO_SugABC | 1.547 | 0.385 |
| H37Rv_KO_MbtN | -0.57 | -0.921 |
| Trans05 | -0.395 | -1.434 |
| macrophage_unactivated | -0.464 | -1.228 |
| IL1 | 0.119 | 0.077 |
| Rapamycin | 0.632 | 0.236 |
| Tcell | 0.222 | 0.857 |
| GMCSF | -0.652 | -0.85 |
| IFNab | -0.831 | -0.417 |
| IFNg | 0.97 | 0.644 |
| IFNg_GMCSF1 | -0.864 | -3.224 |
| Rv1432_day32 | -0.34 | 1.352 |
| Rv1565c_day32 | -0.182 | 0.736 |
| secA2_input | 0.662 | 0.099 |
| delta_Rv3594 | -0.311 | -1.479 |
| delta_Rv3717 | -0.62 | -2.246 |
| delta_Rv3811 | -0.555 | -1.862 |
| delta_Rv0954 | 0.371 | -2.076 |
| PonA1 | -0.813 | -0.091 |
| EccD1_KO | 0.602 | 0.901 |
| EspI_KO | 1.275 | -0.097 |
| PE35_KO | 1.263 | 2.818 |
| PPE68_KO | 1.312 | 2.048 |
| glycerol2 | -1.194 | -2.474 |
| lignocerate | -1.783 | -1.689 |
| oleate | -0.862 | -2.504 |
| phosphatidylcholine | -1.228 | -2.473 |
| acetate | -0.417 | -0.465 |
| glucAc | -0.612 | -0.187 |
| Rv0950ko | -0.25 | -1.517 |
| Rv1096ko | -2.319 | -1.034 |
| Rv3684ko | 0.0 | -3.331 |
| delta_otsA_trehalose | -1.683 | -0.864 |