Top 10 genes with highest correlation to Rv2345/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1947/- | (cc=0.6789) | info on Rv1947/- |
| Rv1000c/- | (cc=0.6093) | info on Rv1000c/- |
| Rv1899c/lppD | (cc=0.6084) | info on Rv1899c/lppD |
| Rv1175c/fadH | (cc=0.5897) | info on Rv1175c/fadH |
| Rv2313c/- | (cc=0.5727) | info on Rv2313c/- |
| Rv2658c/- | (cc=0.5726) | info on Rv2658c/- |
| Rv0399c/lpqK | (cc=0.5689) | info on Rv0399c/lpqK |
| Rv2947c/pks15 | (cc=0.5434) | info on Rv2947c/pks15 |
| Rv2639c/- | (cc=0.541) | info on Rv2639c/- |
| Rv1857/modA | (cc=0.5206) | info on Rv1857/modA |
Correlation of Rv2345/- with Rv1175c/fadH
Normalized LFCs for Rv2345/-:
(description and provenance of datasets)
| Rv2345/- | Rv1175c/fadH | |
| Fe_supp_jason_reseq | -0.019 | -0.78 |
| low_pH_jason_reseq | -0.962 | -0.489 |
| NO_jason_reseq | -0.053 | -0.452 |
| B6_jason_reseq | -0.063 | -0.548 |
| MHCII_jason_reseq | 0.065 | -0.009 |
| Isoniazid02 | -1.199 | -0.784 |
| Rifampicin4 | 0.509 | 0.401 |
| Ethambutol3 | -1.019 | -0.703 |
| Meropenem3 | -1.409 | -1.731 |
| Vancomycin16 | -0.655 | -0.629 |
| Rv2680_day32 | -0.466 | -0.947 |
| H37Rv_KO_MarP | -0.02 | 0.13 |
| hypoxia_3wks | 0.032 | 0.658 |
| hypoxia_6wks | 0.257 | -0.088 |
| glycerol | 0.192 | 0.015 |
| cholesterol | -0.086 | 0.273 |
| AJ | 0.0 | -0.279 |
| Bibs02 | -0.278 | -0.191 |
| Bibs02c | -0.205 | -0.155 |
| BL6 | 0.138 | 0.0 |
| BL6a | 0.118 | -0.043 |
| BXD01 | 0.14 | -0.445 |
| BXD010 | 0.141 | -0.046 |
| BXD011 | -0.262 | 0.178 |
| BXD03 | -0.04 | 0.111 |
| BXD04 | 0.291 | 0.0 |
| BXD05 | 0.374 | 0.488 |
| BXD06 | 0.147 | -0.307 |
| BXD07 | 0.238 | -0.246 |
| BXD08 | 0.434 | -0.429 |
| BXD09 | 0.199 | 0.257 |
| CAST | -0.225 | 0.174 |
| CCcont | 0.024 | -0.121 |
| DS01 | 0.0 | -0.342 |
| DS02 | -0.498 | -0.128 |
| DS04 | -0.142 | -0.429 |
| DS0c | -0.057 | -0.176 |
| GP01 | 0.277 | 0.125 |
| GP02 | 0.072 | -0.992 |
| GP0c | 0.147 | -0.76 |
| NOD | 0.265 | -0.148 |
| NZO | -0.237 | -0.803 |
| PWK | -0.058 | -0.503 |
| H37Rv_KO_CtpC | 0.373 | -0.071 |
| H37Rv_KO_CtpD | 0.605 | 1.533 |
| H37Rv_KO_Rv1272 | 0.291 | 0.161 |
| H37Rv_KO_SugABC | 0.767 | 0.1 |
| H37Rv_KO_MbtN | 0.628 | -0.108 |
| Trans05 | 0.501 | 0.474 |
| macrophage_unactivated | -0.114 | 0.379 |
| IL1 | 0.338 | -0.163 |
| Rapamycin | 0.473 | 0.239 |
| Tcell | 0.039 | 0.391 |
| GMCSF | 0.599 | 0.488 |
| IFNab | 0.311 | -0.166 |
| IFNg | 0.216 | 0.142 |
| IFNg_GMCSF1 | 0.182 | 0.245 |
| Rv1432_day32 | 0.194 | -0.017 |
| Rv1565c_day32 | 0.175 | -0.011 |
| secA2_input | 0.233 | 0.214 |
| delta_Rv3594 | 0.271 | -0.041 |
| delta_Rv3717 | 0.055 | -0.214 |
| delta_Rv3811 | 0.352 | -0.297 |
| delta_Rv0954 | 0.371 | 0.287 |
| PonA1 | -0.321 | -0.031 |
| EccD1_KO | 0.704 | 0.793 |
| EspI_KO | 0.767 | 0.0 |
| PE35_KO | 0.429 | 0.79 |
| PPE68_KO | 0.176 | 0.294 |
| glycerol2 | 0.277 | 0.615 |
| lignocerate | 0.284 | 0.789 |
| oleate | 0.702 | 0.077 |
| phosphatidylcholine | 0.153 | 0.727 |
| acetate | -0.462 | 0.068 |
| glucAc | -0.232 | 0.124 |
| Rv0950ko | 0.434 | -0.057 |
| Rv1096ko | -0.567 | -0.329 |
| Rv3684ko | -0.54 | -0.095 |
| delta_otsA_trehalose | 0.582 | 0.42 |