Top 10 genes with highest correlation to Rv2339/mmpL9:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1984c/cfp21 | (cc=0.6427) | info on Rv1984c/cfp21 |
| Rv1918c/PPE35 | (cc=0.5915) | info on Rv1918c/PPE35 |
| Rv3862c/whiB6 | (cc=0.5504) | info on Rv3862c/whiB6 |
| Rv1521/fadD25 | (cc=0.5484) | info on Rv1521/fadD25 |
| Rv1817/- | (cc=0.5212) | info on Rv1817/- |
| Rv1548c/PPE21 | (cc=0.5209) | info on Rv1548c/PPE21 |
| Rv3164c/moxR3 | (cc=0.5205) | info on Rv3164c/moxR3 |
| Rv1917c/PPE34 | (cc=0.5069) | info on Rv1917c/PPE34 |
| Rv0453/PPE11 | (cc=0.5034) | info on Rv0453/PPE11 |
| Rv1871c/- | (cc=0.5003) | info on Rv1871c/- |
Correlation of Rv2339/mmpL9 with Rv1984c/cfp21
Normalized LFCs for Rv2339/mmpL9:
(description and provenance of datasets)
| Rv2339/mmpL9 | Rv1984c/cfp21 | |
| Fe_supp_jason_reseq | 0.283 | 0.775 |
| low_pH_jason_reseq | -0.164 | -0.08 |
| NO_jason_reseq | -0.349 | -0.307 |
| B6_jason_reseq | -0.289 | -0.195 |
| MHCII_jason_reseq | 0.481 | -0.398 |
| Isoniazid02 | 0.375 | 0.14 |
| Rifampicin4 | 0.0 | -0.03 |
| Ethambutol3 | 0.568 | 0.339 |
| Meropenem3 | -0.052 | 0.258 |
| Vancomycin16 | 0.146 | -0.623 |
| Rv2680_day32 | 0.365 | -0.478 |
| H37Rv_KO_MarP | 0.047 | -0.358 |
| hypoxia_3wks | 0.267 | -0.215 |
| hypoxia_6wks | -0.177 | -0.695 |
| glycerol | -0.426 | -2.041 |
| cholesterol | -0.305 | -0.796 |
| AJ | 0.247 | -0.134 |
| Bibs02 | -0.127 | -0.244 |
| Bibs02c | -0.276 | 0.239 |
| BL6 | 0.196 | -0.179 |
| BL6a | 0.211 | 0.532 |
| BXD01 | 0.253 | 0.26 |
| BXD010 | 0.557 | 0.816 |
| BXD011 | 0.394 | 0.199 |
| BXD03 | 0.36 | 0.416 |
| BXD04 | 0.565 | 0.92 |
| BXD05 | 0.615 | 0.235 |
| BXD06 | 0.413 | 0.017 |
| BXD07 | 0.295 | 0.321 |
| BXD08 | 0.087 | 0.266 |
| BXD09 | 0.41 | 0.138 |
| CAST | 0.404 | -0.307 |
| CCcont | -0.197 | -0.551 |
| DS01 | 0.154 | -0.373 |
| DS02 | -0.126 | -0.377 |
| DS04 | 0.6 | -0.059 |
| DS0c | 0.578 | -0.226 |
| GP01 | 0.591 | 0.853 |
| GP02 | 0.138 | 0.353 |
| GP0c | 0.057 | 0.409 |
| NOD | 1.289 | -0.14 |
| NZO | 0.35 | -0.483 |
| PWK | 0.47 | -0.104 |
| H37Rv_KO_CtpC | 0.488 | 0.108 |
| H37Rv_KO_CtpD | 0.668 | 1.094 |
| H37Rv_KO_Rv1272 | 1.099 | 1.786 |
| H37Rv_KO_SugABC | 0.751 | 0.713 |
| H37Rv_KO_MbtN | 0.571 | 0.425 |
| Trans05 | 1.072 | 0.807 |
| macrophage_unactivated | 0.42 | 0.464 |
| IL1 | 0.611 | -0.053 |
| Rapamycin | 0.724 | 0.092 |
| Tcell | -0.648 | -0.137 |
| GMCSF | 1.225 | 0.079 |
| IFNab | 0.801 | -0.073 |
| IFNg | 1.056 | 0.436 |
| IFNg_GMCSF1 | 0.55 | 0.289 |
| Rv1432_day32 | 0.576 | 0.445 |
| Rv1565c_day32 | 0.3 | 0.567 |
| secA2_input | -0.631 | -0.78 |
| delta_Rv3594 | -0.072 | -0.147 |
| delta_Rv3717 | 0.0 | -0.551 |
| delta_Rv3811 | 0.046 | -0.604 |
| delta_Rv0954 | 0.079 | -0.466 |
| PonA1 | -0.293 | -0.905 |
| EccD1_KO | -0.046 | -0.474 |
| EspI_KO | -0.168 | 0.14 |
| PE35_KO | 0.166 | -0.012 |
| PPE68_KO | 0.355 | 0.074 |
| glycerol2 | 0.0 | -0.203 |
| lignocerate | 0.339 | -0.379 |
| oleate | 0.081 | 0.203 |
| phosphatidylcholine | 0.231 | 0.303 |
| acetate | -0.048 | -0.517 |
| glucAc | -0.227 | -1.067 |
| Rv0950ko | 0.121 | -0.286 |
| Rv1096ko | -1.095 | -1.463 |
| Rv3684ko | -0.223 | -0.088 |
| delta_otsA_trehalose | -0.557 | -1.63 |