Top 10 genes with highest correlation to Rv2327/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1977/- | (cc=0.4454) | info on Rv1977/- |
| Rv2344c/dgt | (cc=0.4394) | info on Rv2344c/dgt |
| Rv2316/uspA | (cc=0.4342) | info on Rv2316/uspA |
| Rv0010c/- | (cc=0.4307) | info on Rv0010c/- |
| Rv0243/fadA2 | (cc=0.4178) | info on Rv0243/fadA2 |
| Rv2989/- | (cc=0.4177) | info on Rv2989/- |
| Rv3197/- | (cc=0.416) | info on Rv3197/- |
| Rv0229c/- | (cc=0.4113) | info on Rv0229c/- |
| Rv2419c/gpgP | (cc=0.4074) | info on Rv2419c/gpgP |
| Rv1030/kdpB | (cc=0.3964) | info on Rv1030/kdpB |
Correlation of Rv2327/- with Rv2344c/dgt
Normalized LFCs for Rv2327/-:
(description and provenance of datasets)
| Rv2327/- | Rv2344c/dgt | |
| Fe_supp_jason_reseq | 1.217 | 1.834 |
| low_pH_jason_reseq | -3.108 | -1.35 |
| NO_jason_reseq | -1.047 | -0.378 |
| B6_jason_reseq | -0.443 | -0.964 |
| MHCII_jason_reseq | -1.731 | -0.849 |
| Isoniazid02 | 1.89 | 1.154 |
| Rifampicin4 | -0.341 | 0.891 |
| Ethambutol3 | 1.042 | 1.079 |
| Meropenem3 | -0.851 | 0.754 |
| Vancomycin16 | -0.334 | -0.374 |
| Rv2680_day32 | -0.131 | -0.698 |
| H37Rv_KO_MarP | -0.327 | -1.082 |
| hypoxia_3wks | -0.845 | 0.475 |
| hypoxia_6wks | 0.067 | 0.342 |
| glycerol | -1.295 | 0.821 |
| cholesterol | -0.354 | -0.223 |
| AJ | -2.123 | -1.506 |
| Bibs02 | -1.221 | 0.348 |
| Bibs02c | -0.435 | -2.004 |
| BL6 | -0.768 | -1.24 |
| BL6a | -2.19 | -2.03 |
| BXD01 | -2.23 | -1.639 |
| BXD010 | -0.69 | -1.728 |
| BXD011 | -2.18 | -1.845 |
| BXD03 | -1.335 | -1.484 |
| BXD04 | -2.428 | -1.928 |
| BXD05 | -2.52 | -1.528 |
| BXD06 | -1.719 | -1.739 |
| BXD07 | -1.316 | -1.238 |
| BXD08 | -2.491 | -1.732 |
| BXD09 | -1.388 | -2.036 |
| CAST | -1.805 | -1.438 |
| CCcont | -0.768 | 0.468 |
| DS01 | -0.45 | -1.312 |
| DS02 | 0.482 | -1.879 |
| DS04 | -2.403 | -1.619 |
| DS0c | -1.332 | -0.729 |
| GP01 | -1.489 | -1.012 |
| GP02 | -0.089 | 0.269 |
| GP0c | 0.624 | -0.51 |
| NOD | -0.548 | -0.347 |
| NZO | -0.15 | -0.6 |
| PWK | -1.795 | -0.769 |
| H37Rv_KO_CtpC | -0.338 | -0.353 |
| H37Rv_KO_CtpD | 0.139 | -1.02 |
| H37Rv_KO_Rv1272 | -1.105 | -0.881 |
| H37Rv_KO_SugABC | -1.624 | -0.596 |
| H37Rv_KO_MbtN | -0.98 | 0.261 |
| Trans05 | -2.565 | -0.88 |
| macrophage_unactivated | -0.208 | 0.559 |
| IL1 | 1.086 | -0.389 |
| Rapamycin | 0.641 | 0.0 |
| Tcell | 0.495 | -0.209 |
| GMCSF | -1.545 | 0.082 |
| IFNab | 0.795 | 0.0 |
| IFNg | 0.0 | 0.083 |
| IFNg_GMCSF1 | 0.198 | 0.192 |
| Rv1432_day32 | 1.982 | -0.271 |
| Rv1565c_day32 | 0.509 | 0.611 |
| secA2_input | -0.945 | -0.415 |
| delta_Rv3594 | -0.323 | 0.751 |
| delta_Rv3717 | -0.839 | -0.347 |
| delta_Rv3811 | -1.213 | 0.641 |
| delta_Rv0954 | 1.647 | 0.322 |
| PonA1 | 0.464 | 0.893 |
| EccD1_KO | -1.434 | 0.434 |
| EspI_KO | 0.231 | 0.214 |
| PE35_KO | -1.033 | 0.303 |
| PPE68_KO | -1.581 | 1.049 |
| glycerol2 | -0.722 | -2.519 |
| lignocerate | -1.218 | -2.612 |
| oleate | -0.457 | -2.362 |
| phosphatidylcholine | -0.721 | -2.944 |
| acetate | 0.116 | 0.379 |
| glucAc | -2.067 | 0.577 |
| Rv0950ko | -0.573 | -0.32 |
| Rv1096ko | -1.559 | -0.896 |
| Rv3684ko | 0.373 | -0.576 |
| delta_otsA_trehalose | -2.964 | -0.4 |