Top 10 genes with highest correlation to Rv2320c/rocE:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3382c/lytB1 | (cc=0.5257) | info on Rv3382c/lytB1 |
| Rv1358/- | (cc=0.4733) | info on Rv1358/- |
| Rv2435c/- | (cc=0.4652) | info on Rv2435c/- |
| Rv0388c/PPE9 | (cc=0.4547) | info on Rv0388c/PPE9 |
| Rv0766c/cyp123 | (cc=0.4438) | info on Rv0766c/cyp123 |
| Rv1000c/- | (cc=0.4385) | info on Rv1000c/- |
| Rv3690/- | (cc=0.4349) | info on Rv3690/- |
| Rv2998/- | (cc=0.4314) | info on Rv2998/- |
| Rv2310/- | (cc=0.4196) | info on Rv2310/- |
| Rv0300/vapB2 | (cc=0.4081) | info on Rv0300/vapB2 |
Correlation of Rv2320c/rocE with Rv3690/-
Normalized LFCs for Rv2320c/rocE:
(description and provenance of datasets)
| Rv2320c/rocE | Rv3690/- | |
| Fe_supp_jason_reseq | -0.251 | -1.318 |
| low_pH_jason_reseq | -0.908 | -1.494 |
| NO_jason_reseq | -0.48 | 0.357 |
| B6_jason_reseq | -0.231 | 0.274 |
| MHCII_jason_reseq | -0.011 | -0.71 |
| Isoniazid02 | 0.048 | 0.263 |
| Rifampicin4 | 0.089 | -1.21 |
| Ethambutol3 | -0.04 | 1.384 |
| Meropenem3 | -0.081 | 0.497 |
| Vancomycin16 | 0.255 | 0.554 |
| Rv2680_day32 | -2.734 | -0.328 |
| H37Rv_KO_MarP | -0.1 | -1.225 |
| hypoxia_3wks | 0.459 | 1.806 |
| hypoxia_6wks | 0.263 | 1.946 |
| glycerol | -0.016 | 0.695 |
| cholesterol | 0.185 | -0.328 |
| AJ | 0.486 | 0.059 |
| Bibs02 | -0.09 | -1.024 |
| Bibs02c | 0.326 | -0.914 |
| BL6 | -0.159 | -0.207 |
| BL6a | 0.748 | 0.452 |
| BXD01 | 0.129 | 1.571 |
| BXD010 | -0.118 | 0.617 |
| BXD011 | 0.386 | 0.986 |
| BXD03 | 0.172 | -0.145 |
| BXD04 | 0.722 | 0.426 |
| BXD05 | 0.254 | 1.182 |
| BXD06 | 0.412 | 0.95 |
| BXD07 | 0.427 | 1.216 |
| BXD08 | -0.169 | 0.248 |
| BXD09 | 0.209 | 1.381 |
| CAST | 0.711 | 2.309 |
| CCcont | -0.453 | 0.487 |
| DS01 | 0.368 | -0.062 |
| DS02 | -0.238 | -0.233 |
| DS04 | -0.548 | -0.634 |
| DS0c | 0.245 | -1.215 |
| GP01 | -0.589 | -0.431 |
| GP02 | -0.636 | -1.069 |
| GP0c | -0.758 | 0.424 |
| NOD | -0.036 | 0.465 |
| NZO | 0.24 | -0.871 |
| PWK | 0.136 | 1.097 |
| H37Rv_KO_CtpC | 0.088 | 1.462 |
| H37Rv_KO_CtpD | 0.745 | 0.504 |
| H37Rv_KO_Rv1272 | -0.521 | 0.966 |
| H37Rv_KO_SugABC | 0.956 | 0.923 |
| H37Rv_KO_MbtN | -0.095 | -0.774 |
| Trans05 | 0.176 | -0.068 |
| macrophage_unactivated | 0.211 | 0.316 |
| IL1 | 0.086 | 0.638 |
| Rapamycin | 0.058 | -0.5 |
| Tcell | 0.094 | 1.962 |
| GMCSF | 0.227 | 0.568 |
| IFNab | 0.342 | 0.91 |
| IFNg | 0.446 | -0.361 |
| IFNg_GMCSF1 | -0.031 | -0.336 |
| Rv1432_day32 | 1.351 | 0.926 |
| Rv1565c_day32 | 0.734 | -0.133 |
| secA2_input | -1.338 | -2.533 |
| delta_Rv3594 | 0.324 | -0.034 |
| delta_Rv3717 | -0.54 | 0.229 |
| delta_Rv3811 | -0.37 | -0.236 |
| delta_Rv0954 | -0.389 | -1.498 |
| PonA1 | -0.388 | 1.353 |
| EccD1_KO | 0.191 | -1.523 |
| EspI_KO | -0.448 | -1.925 |
| PE35_KO | 0.753 | -0.758 |
| PPE68_KO | 0.278 | -0.771 |
| glycerol2 | -0.621 | -1.327 |
| lignocerate | -0.33 | -1.947 |
| oleate | -0.35 | -2.046 |
| phosphatidylcholine | -0.328 | -2.359 |
| acetate | -0.389 | -1.531 |
| glucAc | -0.762 | -1.569 |
| Rv0950ko | 0.229 | 0.467 |
| Rv1096ko | 0.401 | 1.333 |
| Rv3684ko | 0.793 | 2.607 |
| delta_otsA_trehalose | 0.031 | -0.987 |