Top 10 genes with highest correlation to Rv2273/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0571c/- | (cc=0.5468) | info on Rv0571c/- |
| Rv1973/- | (cc=0.5404) | info on Rv1973/- |
| Rv0914c/- | (cc=0.531) | info on Rv0914c/- |
| Rv0449c/- | (cc=0.5238) | info on Rv0449c/- |
| Rv1104/- | (cc=0.5223) | info on Rv1104/- |
| Rv2515c/- | (cc=0.4981) | info on Rv2515c/- |
| Rv1736c/narX | (cc=0.4938) | info on Rv1736c/narX |
| Rv3557c/- | (cc=0.4907) | info on Rv3557c/- |
| Rv0621/- | (cc=0.485) | info on Rv0621/- |
| Rv1688/mpg | (cc=0.467) | info on Rv1688/mpg |
Correlation of Rv2273/- with Rv1688/mpg
Normalized LFCs for Rv2273/-:
(description and provenance of datasets)
| Rv2273/- | Rv1688/mpg | |
| Fe_supp_jason_reseq | 0.655 | 0.268 |
| low_pH_jason_reseq | 0.054 | -0.38 |
| NO_jason_reseq | -0.845 | 0.824 |
| B6_jason_reseq | -0.962 | -0.417 |
| MHCII_jason_reseq | 0.869 | 0.891 |
| Isoniazid02 | -0.69 | 2.306 |
| Rifampicin4 | 0.853 | 1.497 |
| Ethambutol3 | -0.614 | 1.71 |
| Meropenem3 | -0.817 | 0.662 |
| Vancomycin16 | 0.289 | 1.151 |
| Rv2680_day32 | -0.779 | -0.108 |
| H37Rv_KO_MarP | -0.509 | 0.975 |
| hypoxia_3wks | -1.025 | 0.694 |
| hypoxia_6wks | -0.422 | 0.29 |
| glycerol | 0.162 | 0.771 |
| cholesterol | 0.39 | -0.055 |
| AJ | 0.2 | 0.419 |
| Bibs02 | -1.012 | 0.011 |
| Bibs02c | -1.158 | -0.62 |
| BL6 | -1.42 | -1.16 |
| BL6a | -1.936 | -1.56 |
| BXD01 | -0.809 | -1.418 |
| BXD010 | -1.847 | -2.414 |
| BXD011 | -1.546 | -1.055 |
| BXD03 | -3.194 | -1.403 |
| BXD04 | -0.856 | -1.531 |
| BXD05 | -0.466 | -0.167 |
| BXD06 | -1.121 | -1.341 |
| BXD07 | -1.163 | -0.711 |
| BXD08 | -1.562 | -0.779 |
| BXD09 | -2.486 | -0.693 |
| CAST | 0.252 | -0.399 |
| CCcont | -1.275 | -1.138 |
| DS01 | -0.188 | 0.014 |
| DS02 | -0.753 | -0.331 |
| DS04 | 0.235 | 1.172 |
| DS0c | -0.583 | -0.966 |
| GP01 | -0.006 | -1.184 |
| GP02 | -0.252 | -0.207 |
| GP0c | 0.811 | -0.555 |
| NOD | 0.285 | -1.087 |
| NZO | 0.644 | 0.49 |
| PWK | 0.767 | -0.163 |
| H37Rv_KO_CtpC | -2.385 | -1.556 |
| H37Rv_KO_CtpD | -1.999 | -0.529 |
| H37Rv_KO_Rv1272 | 0.241 | -1.535 |
| H37Rv_KO_SugABC | -2.34 | -2.165 |
| H37Rv_KO_MbtN | 0.47 | 0.678 |
| Trans05 | -1.194 | -1.445 |
| macrophage_unactivated | 0.994 | -0.95 |
| IL1 | -0.439 | 0.142 |
| Rapamycin | -1.237 | -0.396 |
| Tcell | 0.74 | 0.156 |
| GMCSF | -2.202 | -0.795 |
| IFNab | 0.0 | -0.076 |
| IFNg | -0.609 | -2.037 |
| IFNg_GMCSF1 | 0.99 | -0.079 |
| Rv1432_day32 | -0.495 | 1.197 |
| Rv1565c_day32 | 0.265 | 0.949 |
| secA2_input | 0.085 | -0.729 |
| delta_Rv3594 | 0.818 | 0.552 |
| delta_Rv3717 | 0.924 | 0.652 |
| delta_Rv3811 | 1.271 | -0.451 |
| delta_Rv0954 | -0.674 | 0.372 |
| PonA1 | 0.579 | 0.085 |
| EccD1_KO | -0.273 | 0.201 |
| EspI_KO | 1.546 | 0.208 |
| PE35_KO | 0.904 | 0.248 |
| PPE68_KO | 0.458 | 0.525 |
| glycerol2 | -0.364 | -0.556 |
| lignocerate | -1.01 | -0.537 |
| oleate | 0.04 | 0.301 |
| phosphatidylcholine | -1.126 | 0.244 |
| acetate | -0.637 | -0.308 |
| glucAc | -0.71 | 1.266 |
| Rv0950ko | 0.618 | -0.808 |
| Rv1096ko | 1.131 | 0.434 |
| Rv3684ko | 2.021 | 1.113 |
| delta_otsA_trehalose | -0.189 | -1.13 |