Top 10 genes with highest correlation to Rv2238c/ahpE:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1882c/- | (cc=0.6081) | info on Rv1882c/- |
| Rv0258c/- | (cc=0.5844) | info on Rv0258c/- |
| Rv3612c/- | (cc=0.5505) | info on Rv3612c/- |
| Rv2020c/- | (cc=0.5351) | info on Rv2020c/- |
| Rv0080/- | (cc=0.532) | info on Rv0080/- |
| Rv2007c/fdxA | (cc=0.5253) | info on Rv2007c/fdxA |
| Rv0470A/- | (cc=0.5058) | info on Rv0470A/- |
| Rv3375/amiD | (cc=0.5029) | info on Rv3375/amiD |
| Rv1442/bisC | (cc=0.4957) | info on Rv1442/bisC |
| Rv0269c/- | (cc=0.4907) | info on Rv0269c/- |
Correlation of Rv2238c/ahpE with Rv0470A/-
Normalized LFCs for Rv2238c/ahpE:
(description and provenance of datasets)
| Rv2238c/ahpE | Rv0470A/- | |
| Fe_supp_jason_reseq | 2.038 | -0.748 |
| low_pH_jason_reseq | -1.432 | -0.236 |
| NO_jason_reseq | 1.04 | -0.139 |
| B6_jason_reseq | 2.593 | 0.027 |
| MHCII_jason_reseq | 0.036 | 0.075 |
| Isoniazid02 | 0.861 | 1.019 |
| Rifampicin4 | 0.761 | 0.571 |
| Ethambutol3 | 0.72 | 0.776 |
| Meropenem3 | -0.081 | 1.85 |
| Vancomycin16 | -0.78 | 0.716 |
| Rv2680_day32 | -0.459 | -0.505 |
| H37Rv_KO_MarP | 0.358 | 0.686 |
| hypoxia_3wks | -1.898 | -0.415 |
| hypoxia_6wks | -1.733 | -1.401 |
| glycerol | 0.312 | -0.009 |
| cholesterol | 0.605 | -0.15 |
| AJ | -0.983 | -0.812 |
| Bibs02 | -0.26 | -0.099 |
| Bibs02c | -2.739 | 0.362 |
| BL6 | -2.406 | -1.052 |
| BL6a | -1.913 | -0.492 |
| BXD01 | -2.376 | -1.861 |
| BXD010 | -2.463 | -1.26 |
| BXD011 | -0.987 | -1.343 |
| BXD03 | -2.467 | -1.932 |
| BXD04 | -2.143 | -1.959 |
| BXD05 | -1.762 | -1.381 |
| BXD06 | -2.567 | -1.533 |
| BXD07 | -1.523 | -1.565 |
| BXD08 | -1.821 | -1.577 |
| BXD09 | -2.209 | -2.007 |
| CAST | -0.757 | 0.065 |
| CCcont | -2.724 | -0.641 |
| DS01 | 0.039 | 0.71 |
| DS02 | 0.271 | 0.714 |
| DS04 | -0.389 | 0.96 |
| DS0c | 0.679 | 0.658 |
| GP01 | -1.629 | -1.03 |
| GP02 | -1.442 | -0.776 |
| GP0c | -2.145 | -1.118 |
| NOD | -0.542 | 0.073 |
| NZO | 0.364 | -0.341 |
| PWK | 0.244 | -0.428 |
| H37Rv_KO_CtpC | -0.169 | -0.818 |
| H37Rv_KO_CtpD | 0.177 | 0.323 |
| H37Rv_KO_Rv1272 | -1.619 | -0.706 |
| H37Rv_KO_SugABC | -1.297 | -0.798 |
| H37Rv_KO_MbtN | -0.207 | -1.506 |
| Trans05 | -1.566 | -0.854 |
| macrophage_unactivated | -0.83 | -0.66 |
| IL1 | -0.78 | -0.46 |
| Rapamycin | -0.807 | -0.411 |
| Tcell | -0.411 | -0.593 |
| GMCSF | -0.333 | -0.232 |
| IFNab | -0.381 | -0.565 |
| IFNg | -0.703 | -0.802 |
| IFNg_GMCSF1 | 2.951 | -0.277 |
| Rv1432_day32 | 0.0 | -1.448 |
| Rv1565c_day32 | 0.0 | -0.329 |
| secA2_input | -3.478 | 0.534 |
| delta_Rv3594 | -1.576 | -1.834 |
| delta_Rv3717 | -1.198 | -1.651 |
| delta_Rv3811 | -2.492 | -1.517 |
| delta_Rv0954 | -1.206 | -0.099 |
| PonA1 | -1.309 | -0.293 |
| EccD1_KO | -0.204 | -0.753 |
| EspI_KO | -1.877 | -0.742 |
| PE35_KO | -2.208 | -0.633 |
| PPE68_KO | -2.208 | -0.909 |
| glycerol2 | 0.0 | 0.611 |
| lignocerate | 0.0 | 0.497 |
| oleate | 0.0 | 0.214 |
| phosphatidylcholine | 0.0 | 0.336 |
| acetate | 0.0 | -0.04 |
| glucAc | 0.0 | -0.321 |
| Rv0950ko | -0.425 | 1.113 |
| Rv1096ko | 0.911 | 0.893 |
| Rv3684ko | -1.11 | 0.678 |
| delta_otsA_trehalose | 1.131 | 0.027 |