Top 10 genes with highest correlation to Rv2181/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1244/lpqZ | (cc=0.4754) | info on Rv1244/lpqZ |
| Rv2721c/- | (cc=0.4655) | info on Rv2721c/- |
| Rv3818/- | (cc=0.423) | info on Rv3818/- |
| Rv1491c/- | (cc=0.4129) | info on Rv1491c/- |
| Rv1886c/fbpB | (cc=0.3835) | info on Rv1886c/fbpB |
| Rv1339/- | (cc=0.3829) | info on Rv1339/- |
| Rv1111c/- | (cc=0.3787) | info on Rv1111c/- |
| Rv1780/- | (cc=0.3756) | info on Rv1780/- |
| Rv1861/- | (cc=0.3728) | info on Rv1861/- |
| Rv1546/- | (cc=0.3662) | info on Rv1546/- |
Correlation of Rv2181/- with Rv1244/lpqZ
Normalized LFCs for Rv2181/-:
(description and provenance of datasets)
| Rv2181/- | Rv1244/lpqZ | |
| Fe_supp_jason_reseq | -1.503 | -1.489 |
| low_pH_jason_reseq | -0.477 | -0.269 |
| NO_jason_reseq | 0.903 | 3.568 |
| B6_jason_reseq | -0.701 | 0.722 |
| MHCII_jason_reseq | -0.895 | -0.935 |
| Isoniazid02 | 0.47 | 0.988 |
| Rifampicin4 | -1.053 | -6.0 |
| Ethambutol3 | 0.125 | 1.135 |
| Meropenem3 | 0.707 | -3.11 |
| Vancomycin16 | 0.207 | -6.0 |
| Rv2680_day32 | -0.662 | -0.398 |
| H37Rv_KO_MarP | -1.242 | -3.509 |
| hypoxia_3wks | 2.656 | 4.466 |
| hypoxia_6wks | 1.361 | 3.974 |
| glycerol | -0.452 | -1.463 |
| cholesterol | -0.84 | -0.11 |
| AJ | -0.61 | -3.277 |
| Bibs02 | 0.566 | -1.449 |
| Bibs02c | -0.168 | -2.011 |
| BL6 | 0.834 | -0.672 |
| BL6a | 0.253 | -1.68 |
| BXD01 | 0.197 | -1.955 |
| BXD010 | 0.316 | 0.345 |
| BXD011 | 0.43 | -0.331 |
| BXD03 | 0.222 | 0.072 |
| BXD04 | 0.76 | -0.374 |
| BXD05 | 0.291 | -0.258 |
| BXD06 | 0.662 | 0.024 |
| BXD07 | 0.444 | -1.641 |
| BXD08 | 0.114 | -1.406 |
| BXD09 | -0.096 | -1.529 |
| CAST | -0.175 | -2.603 |
| CCcont | -0.37 | -0.622 |
| DS01 | 0.019 | -3.145 |
| DS02 | -1.336 | -2.213 |
| DS04 | 0.228 | -2.051 |
| DS0c | 0.091 | -2.336 |
| GP01 | -0.139 | -0.029 |
| GP02 | 0.068 | -1.343 |
| GP0c | 0.962 | 0.642 |
| NOD | -0.107 | -0.792 |
| NZO | -0.646 | -1.725 |
| PWK | 1.145 | -0.774 |
| H37Rv_KO_CtpC | 0.493 | -2.041 |
| H37Rv_KO_CtpD | -0.071 | -1.128 |
| H37Rv_KO_Rv1272 | 0.136 | -1.129 |
| H37Rv_KO_SugABC | 0.309 | -2.267 |
| H37Rv_KO_MbtN | 1.519 | 2.575 |
| Trans05 | 0.71 | 1.216 |
| macrophage_unactivated | -0.672 | -1.079 |
| IL1 | 0.119 | -0.012 |
| Rapamycin | -0.577 | -0.746 |
| Tcell | 0.619 | 0.401 |
| GMCSF | -0.296 | -1.529 |
| IFNab | 0.239 | 0.163 |
| IFNg | -0.845 | -0.914 |
| IFNg_GMCSF1 | -1.046 | -1.838 |
| Rv1432_day32 | 0.262 | 0.533 |
| Rv1565c_day32 | 2.691 | 0.218 |
| secA2_input | -0.452 | -1.506 |
| delta_Rv3594 | 0.731 | 0.878 |
| delta_Rv3717 | 0.664 | 1.368 |
| delta_Rv3811 | 0.336 | 0.628 |
| delta_Rv0954 | 0.31 | 0.008 |
| PonA1 | 0.195 | -2.361 |
| EccD1_KO | 0.579 | 1.253 |
| EspI_KO | 0.066 | 0.645 |
| PE35_KO | 0.05 | -0.245 |
| PPE68_KO | 0.09 | -0.237 |
| glycerol2 | -2.247 | -1.033 |
| lignocerate | 0.708 | -1.019 |
| oleate | -0.362 | -1.045 |
| phosphatidylcholine | 0.255 | -1.852 |
| acetate | -0.406 | -0.306 |
| glucAc | -0.524 | -0.575 |
| Rv0950ko | 0.13 | -1.948 |
| Rv1096ko | 0.241 | 0.416 |
| Rv3684ko | -0.475 | 0.848 |
| delta_otsA_trehalose | -0.678 | 0.449 |