Top 10 genes with highest correlation to Rv2141c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1657/argR | (cc=0.5856) | info on Rv1657/argR |
| Rv1040c/PE8 | (cc=0.5422) | info on Rv1040c/PE8 |
| Rv2728c/- | (cc=0.5358) | info on Rv2728c/- |
| Rv1077/cbs | (cc=0.529) | info on Rv1077/cbs |
| Rv0428c/- | (cc=0.5138) | info on Rv0428c/- |
| Rv0243/fadA2 | (cc=0.5117) | info on Rv0243/fadA2 |
| Rv2671/ribD | (cc=0.5007) | info on Rv2671/ribD |
| Rv1070c/echA8 | (cc=0.4964) | info on Rv1070c/echA8 |
| Rv3728/- | (cc=0.4958) | info on Rv3728/- |
| Rv0079/- | (cc=0.4921) | info on Rv0079/- |
Correlation of Rv2141c/- with Rv1657/argR
Normalized LFCs for Rv2141c/-:
(description and provenance of datasets)
| Rv2141c/- | Rv1657/argR | |
| Fe_supp_jason_reseq | -0.224 | -1.639 |
| low_pH_jason_reseq | -1.116 | -2.076 |
| NO_jason_reseq | -3.187 | -1.801 |
| B6_jason_reseq | -0.399 | 0.006 |
| MHCII_jason_reseq | 0.112 | 0.433 |
| Isoniazid02 | 0.802 | 0.969 |
| Rifampicin4 | 0.341 | 0.479 |
| Ethambutol3 | 1.085 | 0.495 |
| Meropenem3 | 0.208 | -0.157 |
| Vancomycin16 | 0.276 | 0.0 |
| Rv2680_day32 | -1.012 | -2.613 |
| H37Rv_KO_MarP | 0.278 | 0.363 |
| hypoxia_3wks | -0.722 | -1.192 |
| hypoxia_6wks | -0.24 | -1.656 |
| glycerol | 0.489 | 1.641 |
| cholesterol | -0.556 | -0.061 |
| AJ | -0.013 | -1.037 |
| Bibs02 | -0.266 | -0.156 |
| Bibs02c | 0.534 | -1.432 |
| BL6 | -0.106 | -2.797 |
| BL6a | 0.043 | -2.043 |
| BXD01 | -0.972 | -2.399 |
| BXD010 | -0.313 | -1.531 |
| BXD011 | -1.287 | -3.232 |
| BXD03 | -0.652 | -2.075 |
| BXD04 | 0.072 | -1.329 |
| BXD05 | -1.419 | -1.63 |
| BXD06 | -0.803 | -2.42 |
| BXD07 | -1.18 | -2.322 |
| BXD08 | -0.532 | -2.3 |
| BXD09 | -0.678 | -3.271 |
| CAST | -0.611 | -0.556 |
| CCcont | -0.609 | -0.936 |
| DS01 | 0.631 | 0.441 |
| DS02 | -0.134 | -0.581 |
| DS04 | -0.097 | 0.476 |
| DS0c | 0.911 | 0.097 |
| GP01 | -0.084 | -0.916 |
| GP02 | -0.63 | -1.791 |
| GP0c | -0.583 | -1.533 |
| NOD | -0.327 | -0.69 |
| NZO | -0.487 | -2.384 |
| PWK | 0.193 | 0.21 |
| H37Rv_KO_CtpC | -0.247 | 0.128 |
| H37Rv_KO_CtpD | -0.233 | -3.369 |
| H37Rv_KO_Rv1272 | 0.207 | -1.829 |
| H37Rv_KO_SugABC | 0.788 | -0.995 |
| H37Rv_KO_MbtN | -0.317 | -1.995 |
| Trans05 | -0.073 | -3.393 |
| macrophage_unactivated | -0.439 | -1.626 |
| IL1 | -0.543 | -0.955 |
| Rapamycin | -0.252 | -1.402 |
| Tcell | 0.251 | -1.307 |
| GMCSF | -0.523 | -2.038 |
| IFNab | 0.0 | -0.357 |
| IFNg | -0.914 | -2.51 |
| IFNg_GMCSF1 | -0.622 | -2.055 |
| Rv1432_day32 | -1.05 | -3.331 |
| Rv1565c_day32 | 0.234 | -0.025 |
| secA2_input | 0.834 | 0.24 |
| delta_Rv3594 | -0.196 | -0.378 |
| delta_Rv3717 | -0.593 | -1.114 |
| delta_Rv3811 | -0.412 | -1.735 |
| delta_Rv0954 | -0.062 | 0.362 |
| PonA1 | -0.397 | -0.268 |
| EccD1_KO | 0.724 | 0.694 |
| EspI_KO | 0.077 | 1.483 |
| PE35_KO | 0.058 | 0.499 |
| PPE68_KO | -0.246 | -0.029 |
| glycerol2 | 0.97 | 0.017 |
| lignocerate | -0.552 | -0.774 |
| oleate | -0.323 | -1.198 |
| phosphatidylcholine | -0.811 | -1.566 |
| acetate | 0.587 | -0.509 |
| glucAc | -0.392 | -0.921 |
| Rv0950ko | 0.579 | -0.787 |
| Rv1096ko | 0.579 | 0.528 |
| Rv3684ko | 0.472 | -0.586 |
| delta_otsA_trehalose | 0.066 | -0.58 |