Top 10 genes with highest correlation to Rv2128/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3363c/- | (cc=0.5268) | info on Rv3363c/- |
| Rv2169c/- | (cc=0.5069) | info on Rv2169c/- |
| Rv2909c/rpsP | (cc=0.4902) | info on Rv2909c/rpsP |
| Rv0526/- | (cc=0.4862) | info on Rv0526/- |
| Rv3455c/truA | (cc=0.4842) | info on Rv3455c/truA |
| Rv1869c/- | (cc=0.4808) | info on Rv1869c/- |
| Rv1397c/vapC10 | (cc=0.4666) | info on Rv1397c/vapC10 |
| Rv2270/lppN | (cc=0.4529) | info on Rv2270/lppN |
| Rv2083/- | (cc=0.4512) | info on Rv2083/- |
| Rv2655c/- | (cc=0.4494) | info on Rv2655c/- |
Correlation of Rv2128/- with Rv3363c/-
Normalized LFCs for Rv2128/-:
(description and provenance of datasets)
| Rv2128/- | Rv3363c/- | |
| Fe_supp_jason_reseq | 1.972 | 0.289 |
| low_pH_jason_reseq | 1.355 | 0.775 |
| NO_jason_reseq | 0.284 | -0.63 |
| B6_jason_reseq | 1.181 | 0.575 |
| MHCII_jason_reseq | 1.022 | 0.795 |
| Isoniazid02 | -0.162 | 0.355 |
| Rifampicin4 | -0.734 | -1.194 |
| Ethambutol3 | 0.097 | -0.557 |
| Meropenem3 | 0.806 | -0.158 |
| Vancomycin16 | -0.828 | -0.172 |
| Rv2680_day32 | 0.241 | -0.786 |
| H37Rv_KO_MarP | -0.842 | 0.014 |
| hypoxia_3wks | -1.34 | -0.231 |
| hypoxia_6wks | -1.831 | 0.023 |
| glycerol | -0.13 | 0.408 |
| cholesterol | -0.637 | 0.45 |
| AJ | 0.703 | 0.079 |
| Bibs02 | -0.148 | 0.616 |
| Bibs02c | 0.402 | -0.821 |
| BL6 | -0.887 | 0.017 |
| BL6a | 0.529 | -0.25 |
| BXD01 | -0.924 | -0.374 |
| BXD010 | 0.27 | -0.073 |
| BXD011 | 0.604 | 0.018 |
| BXD03 | -0.677 | 0.449 |
| BXD04 | 1.188 | -0.044 |
| BXD05 | -0.215 | -0.137 |
| BXD06 | -0.021 | -0.136 |
| BXD07 | 0.063 | -0.12 |
| BXD08 | -0.142 | 0.01 |
| BXD09 | 0.305 | -0.222 |
| CAST | -0.41 | 0.506 |
| CCcont | -1.254 | -0.697 |
| DS01 | -1.466 | -0.51 |
| DS02 | 0.417 | -0.109 |
| DS04 | -1.123 | -1.105 |
| DS0c | -1.606 | -0.396 |
| GP01 | -2.407 | -1.314 |
| GP02 | -0.263 | -0.626 |
| GP0c | -1.904 | 0.162 |
| NOD | 0.052 | -0.096 |
| NZO | -0.877 | -0.465 |
| PWK | 0.512 | -0.142 |
| H37Rv_KO_CtpC | 0.462 | 0.252 |
| H37Rv_KO_CtpD | -0.25 | -1.654 |
| H37Rv_KO_Rv1272 | 1.962 | 0.584 |
| H37Rv_KO_SugABC | 0.144 | -0.14 |
| H37Rv_KO_MbtN | 0.263 | -0.538 |
| Trans05 | 1.251 | 1.0 |
| macrophage_unactivated | -0.906 | -0.448 |
| IL1 | 0.371 | 0.359 |
| Rapamycin | 0.709 | -0.322 |
| Tcell | -0.935 | -0.808 |
| GMCSF | -0.539 | -0.763 |
| IFNab | -0.868 | 0.0 |
| IFNg | -0.454 | 0.045 |
| IFNg_GMCSF1 | -2.338 | 0.666 |
| Rv1432_day32 | 0.18 | 1.076 |
| Rv1565c_day32 | -0.12 | -0.488 |
| secA2_input | -1.191 | -0.164 |
| delta_Rv3594 | -0.269 | -0.285 |
| delta_Rv3717 | -0.919 | -1.44 |
| delta_Rv3811 | -0.381 | -0.671 |
| delta_Rv0954 | -0.138 | -1.07 |
| PonA1 | -1.295 | -1.526 |
| EccD1_KO | 0.414 | 0.0 |
| EspI_KO | 1.221 | -1.047 |
| PE35_KO | -0.245 | -0.866 |
| PPE68_KO | -0.166 | -1.289 |
| glycerol2 | -2.935 | -2.812 |
| lignocerate | -1.894 | -1.844 |
| oleate | -2.04 | -2.2 |
| phosphatidylcholine | -2.703 | -2.286 |
| acetate | -1.483 | -2.276 |
| glucAc | -2.212 | -1.217 |
| Rv0950ko | -0.537 | 0.196 |
| Rv1096ko | -1.544 | 0.501 |
| Rv3684ko | -0.059 | -0.147 |
| delta_otsA_trehalose | 1.206 | 4.02 |