Top 10 genes with highest correlation to Rv2128/-:
update plot | correlation | link to info on gene |
---|---|---|
Rv3363c/- | (cc=0.5268) | info on Rv3363c/- |
Rv2169c/- | (cc=0.5069) | info on Rv2169c/- |
Rv2909c/rpsP | (cc=0.4902) | info on Rv2909c/rpsP |
Rv0526/- | (cc=0.4862) | info on Rv0526/- |
Rv3455c/truA | (cc=0.4842) | info on Rv3455c/truA |
Rv1869c/- | (cc=0.4808) | info on Rv1869c/- |
Rv1397c/vapC10 | (cc=0.4666) | info on Rv1397c/vapC10 |
Rv2270/lppN | (cc=0.4529) | info on Rv2270/lppN |
Rv2083/- | (cc=0.4512) | info on Rv2083/- |
Rv2655c/- | (cc=0.4494) | info on Rv2655c/- |
Correlation of Rv2128/- with Rv2083/-
Normalized LFCs for Rv2128/-:
(description and provenance of datasets)
Rv2128/- | Rv2083/- | |
Fe_supp_jason_reseq | 1.972 | 0.221 |
low_pH_jason_reseq | 1.355 | 0.843 |
NO_jason_reseq | 0.284 | -0.782 |
B6_jason_reseq | 1.181 | -0.223 |
MHCII_jason_reseq | 1.022 | 0.977 |
Isoniazid02 | -0.162 | 0.64 |
Rifampicin4 | -0.734 | 1.324 |
Ethambutol3 | 0.097 | 2.234 |
Meropenem3 | 0.806 | 0.758 |
Vancomycin16 | -0.828 | 0.499 |
Rv2680_day32 | 0.241 | 0.184 |
H37Rv_KO_MarP | -0.842 | -0.217 |
hypoxia_3wks | -1.34 | 0.53 |
hypoxia_6wks | -1.831 | -0.215 |
glycerol | -0.13 | 0.613 |
cholesterol | -0.637 | 0.119 |
AJ | 0.703 | 0.829 |
Bibs02 | -0.148 | 0.27 |
Bibs02c | 0.402 | 1.643 |
BL6 | -0.887 | -0.434 |
BL6a | 0.529 | 1.247 |
BXD01 | -0.924 | -0.269 |
BXD010 | 0.27 | 0.488 |
BXD011 | 0.604 | -0.09 |
BXD03 | -0.677 | 0.594 |
BXD04 | 1.188 | 0.294 |
BXD05 | -0.215 | 0.045 |
BXD06 | -0.021 | -0.221 |
BXD07 | 0.063 | -0.458 |
BXD08 | -0.142 | 0.116 |
BXD09 | 0.305 | 0.365 |
CAST | -0.41 | 0.527 |
CCcont | -1.254 | -0.817 |
DS01 | -1.466 | 1.304 |
DS02 | 0.417 | 0.632 |
DS04 | -1.123 | 0.371 |
DS0c | -1.606 | -0.127 |
GP01 | -2.407 | 0.039 |
GP02 | -0.263 | 1.442 |
GP0c | -1.904 | 0.378 |
NOD | 0.052 | 0.574 |
NZO | -0.877 | 0.688 |
PWK | 0.512 | 0.709 |
H37Rv_KO_CtpC | 0.462 | 1.012 |
H37Rv_KO_CtpD | -0.25 | 0.686 |
H37Rv_KO_Rv1272 | 1.962 | 1.624 |
H37Rv_KO_SugABC | 0.144 | 0.703 |
H37Rv_KO_MbtN | 0.263 | -0.832 |
Trans05 | 1.251 | 0.935 |
macrophage_unactivated | -0.906 | 0.83 |
IL1 | 0.371 | 0.952 |
Rapamycin | 0.709 | 0.147 |
Tcell | -0.935 | 0.137 |
GMCSF | -0.539 | 0.473 |
IFNab | -0.868 | 1.052 |
IFNg | -0.454 | 1.229 |
IFNg_GMCSF1 | -2.338 | 0.581 |
Rv1432_day32 | 0.18 | 0.777 |
Rv1565c_day32 | -0.12 | 0.584 |
secA2_input | -1.191 | 0.205 |
delta_Rv3594 | -0.269 | 0.662 |
delta_Rv3717 | -0.919 | 0.94 |
delta_Rv3811 | -0.381 | 0.956 |
delta_Rv0954 | -0.138 | 0.804 |
PonA1 | -1.295 | -0.882 |
EccD1_KO | 0.414 | 1.184 |
EspI_KO | 1.221 | 1.363 |
PE35_KO | -0.245 | 0.974 |
PPE68_KO | -0.166 | 0.336 |
glycerol2 | -2.935 | -0.921 |
lignocerate | -1.894 | -1.23 |
oleate | -2.04 | -0.037 |
phosphatidylcholine | -2.703 | -0.534 |
acetate | -1.483 | -1.769 |
glucAc | -2.212 | -2.327 |
Rv0950ko | -0.537 | -0.748 |
Rv1096ko | -1.544 | -0.679 |
Rv3684ko | -0.059 | -1.461 |
delta_otsA_trehalose | 1.206 | 1.124 |