Top 10 genes with highest correlation to Rv2073c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0338c/- | (cc=0.5348) | info on Rv0338c/- |
| Rv2090/- | (cc=0.5078) | info on Rv2090/- |
| Rv3775/lipE | (cc=0.4726) | info on Rv3775/lipE |
| Rv0320/- | (cc=0.4669) | info on Rv0320/- |
| Rv1838c/vapC13 | (cc=0.4591) | info on Rv1838c/vapC13 |
| Rv2095c/pafC | (cc=0.4505) | info on Rv2095c/pafC |
| Rv0994/moeA1 | (cc=0.4498) | info on Rv0994/moeA1 |
| Rv1768/PE_PGRS31 | (cc=0.4359) | info on Rv1768/PE_PGRS31 |
| Rv0069c/sdaA | (cc=0.4251) | info on Rv0069c/sdaA |
| Rv3617/ephA | (cc=0.4244) | info on Rv3617/ephA |
Correlation of Rv2073c/- with Rv0069c/sdaA
Normalized LFCs for Rv2073c/-:
(description and provenance of datasets)
| Rv2073c/- | Rv0069c/sdaA | |
| Fe_supp_jason_reseq | -0.893 | 0.205 |
| low_pH_jason_reseq | -0.358 | -1.367 |
| NO_jason_reseq | 0.924 | -1.265 |
| B6_jason_reseq | 0.104 | -0.208 |
| MHCII_jason_reseq | -0.216 | 0.127 |
| Isoniazid02 | 0.311 | -0.049 |
| Rifampicin4 | -1.18 | -0.233 |
| Ethambutol3 | -0.202 | 0.627 |
| Meropenem3 | -0.798 | 0.278 |
| Vancomycin16 | -1.47 | 0.836 |
| Rv2680_day32 | 0.191 | -0.372 |
| H37Rv_KO_MarP | -1.175 | 0.217 |
| hypoxia_3wks | 0.439 | -0.319 |
| hypoxia_6wks | 0.313 | -0.299 |
| glycerol | 0.85 | 2.392 |
| cholesterol | 4.139 | 6.0 |
| AJ | 0.541 | 0.187 |
| Bibs02 | 0.33 | -0.592 |
| Bibs02c | -0.138 | 0.196 |
| BL6 | -0.017 | 0.084 |
| BL6a | -0.881 | 0.307 |
| BXD01 | -1.569 | -0.154 |
| BXD010 | -1.581 | -0.171 |
| BXD011 | -0.832 | 0.68 |
| BXD03 | -1.017 | -0.631 |
| BXD04 | -1.23 | -0.425 |
| BXD05 | -0.607 | -0.223 |
| BXD06 | -1.164 | -0.038 |
| BXD07 | -0.859 | -0.207 |
| BXD08 | -1.132 | 0.329 |
| BXD09 | -0.323 | 0.076 |
| CAST | -0.504 | -0.976 |
| CCcont | -0.685 | 0.176 |
| DS01 | 0.157 | -0.279 |
| DS02 | 0.058 | -0.325 |
| DS04 | -0.215 | -1.036 |
| DS0c | 0.803 | 0.363 |
| GP01 | 0.849 | 0.265 |
| GP02 | 0.423 | -0.138 |
| GP0c | 0.613 | 0.639 |
| NOD | -0.817 | -1.596 |
| NZO | 1.156 | -1.472 |
| PWK | -1.105 | 0.183 |
| H37Rv_KO_CtpC | 0.204 | 0.213 |
| H37Rv_KO_CtpD | 1.25 | -1.75 |
| H37Rv_KO_Rv1272 | 0.006 | -0.72 |
| H37Rv_KO_SugABC | 1.134 | 0.94 |
| H37Rv_KO_MbtN | -0.179 | 1.301 |
| Trans05 | 0.808 | -0.5 |
| macrophage_unactivated | -0.499 | 0.18 |
| IL1 | 1.471 | 0.383 |
| Rapamycin | 0.512 | 0.807 |
| Tcell | 0.046 | 0.42 |
| GMCSF | 0.792 | -0.264 |
| IFNab | 0.541 | 1.167 |
| IFNg | 0.072 | 0.249 |
| IFNg_GMCSF1 | 0.33 | -0.512 |
| Rv1432_day32 | 1.021 | 0.415 |
| Rv1565c_day32 | -0.038 | -0.355 |
| secA2_input | 0.473 | 1.656 |
| delta_Rv3594 | -0.422 | -0.783 |
| delta_Rv3717 | 0.233 | -0.2 |
| delta_Rv3811 | -0.122 | 0.299 |
| delta_Rv0954 | -0.143 | 0.399 |
| PonA1 | -0.508 | 0.943 |
| EccD1_KO | 1.697 | 0.802 |
| EspI_KO | 0.559 | -0.645 |
| PE35_KO | 0.618 | 0.055 |
| PPE68_KO | 0.653 | 0.781 |
| glycerol2 | -0.064 | 0.171 |
| lignocerate | 0.363 | 0.183 |
| oleate | -1.46 | -0.264 |
| phosphatidylcholine | -0.223 | -0.067 |
| acetate | 0.214 | -0.191 |
| glucAc | 0.229 | -0.249 |
| Rv0950ko | 0.681 | 0.582 |
| Rv1096ko | 0.875 | 0.582 |
| Rv3684ko | 0.468 | -0.069 |
| delta_otsA_trehalose | 0.315 | 0.027 |