Top 10 genes with highest correlation to Rv2047c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0202c/mmpL11 | (cc=0.8379) | info on Rv0202c/mmpL11 |
| Rv1127c/ppdK | (cc=0.8318) | info on Rv1127c/ppdK |
| Rv2048c/pks12 | (cc=0.8168) | info on Rv2048c/pks12 |
| Rv0450c/mmpL4 | (cc=0.774) | info on Rv0450c/mmpL4 |
| Rv3495c/lprN | (cc=0.686) | info on Rv3495c/lprN |
| Rv3500c/yrbE4B | (cc=0.6855) | info on Rv3500c/yrbE4B |
| Rv3501c/yrbE4A | (cc=0.6795) | info on Rv3501c/yrbE4A |
| Rv2475c/- | (cc=0.6678) | info on Rv2475c/- |
| Rv2799/- | (cc=0.6518) | info on Rv2799/- |
| Rv1590/- | (cc=0.6426) | info on Rv1590/- |
Correlation of Rv2047c/- with Rv3495c/lprN
Normalized LFCs for Rv2047c/-:
(description and provenance of datasets)
| Rv2047c/- | Rv3495c/lprN | |
| Fe_supp_jason_reseq | 1.124 | 0.295 |
| low_pH_jason_reseq | 1.372 | 0.304 |
| NO_jason_reseq | -4.082 | 0.538 |
| B6_jason_reseq | -1.144 | -1.572 |
| MHCII_jason_reseq | -1.52 | -2.034 |
| Isoniazid02 | -0.851 | 0.131 |
| Rifampicin4 | -0.945 | 0.764 |
| Ethambutol3 | -0.575 | 0.195 |
| Meropenem3 | -0.056 | -1.224 |
| Vancomycin16 | 1.754 | 0.676 |
| Rv2680_day32 | -2.847 | -2.504 |
| H37Rv_KO_MarP | 0.179 | 0.254 |
| hypoxia_3wks | -0.973 | 0.132 |
| hypoxia_6wks | -1.894 | 0.228 |
| glycerol | -2.674 | -1.343 |
| cholesterol | -2.967 | -4.151 |
| AJ | -3.072 | -3.627 |
| Bibs02 | -0.958 | -0.527 |
| Bibs02c | -1.675 | -1.426 |
| BL6 | -0.817 | -1.169 |
| BL6a | -2.246 | -1.741 |
| BXD01 | -1.795 | -1.162 |
| BXD010 | -2.081 | -1.373 |
| BXD011 | -1.903 | -1.376 |
| BXD03 | -2.106 | -1.553 |
| BXD04 | -1.298 | -1.191 |
| BXD05 | -1.93 | -1.267 |
| BXD06 | -1.839 | -1.2 |
| BXD07 | -1.762 | -1.344 |
| BXD08 | -1.908 | -1.321 |
| BXD09 | -1.936 | -1.677 |
| CAST | -2.327 | -2.604 |
| CCcont | -0.114 | -0.727 |
| DS01 | -2.577 | -3.217 |
| DS02 | -2.88 | -1.727 |
| DS04 | -1.113 | -2.561 |
| DS0c | -3.111 | -1.193 |
| GP01 | 0.043 | -0.207 |
| GP02 | -0.943 | -1.198 |
| GP0c | -0.12 | -0.478 |
| NOD | -2.974 | -2.54 |
| NZO | -1.796 | -1.78 |
| PWK | -2.401 | -1.724 |
| H37Rv_KO_CtpC | -0.812 | -1.837 |
| H37Rv_KO_CtpD | -1.436 | -0.498 |
| H37Rv_KO_Rv1272 | -0.705 | -0.604 |
| H37Rv_KO_SugABC | -1.421 | -0.482 |
| H37Rv_KO_MbtN | 1.275 | 0.073 |
| Trans05 | -0.207 | -0.95 |
| macrophage_unactivated | -2.241 | -0.811 |
| IL1 | 2.091 | 2.462 |
| Rapamycin | 1.685 | 1.921 |
| Tcell | -0.857 | 0.414 |
| GMCSF | -3.599 | -1.901 |
| IFNab | -0.892 | -1.823 |
| IFNg | -1.783 | -1.109 |
| IFNg_GMCSF1 | -1.838 | -2.3 |
| Rv1432_day32 | -2.265 | -2.415 |
| Rv1565c_day32 | -1.783 | -3.192 |
| secA2_input | 0.102 | -0.399 |
| delta_Rv3594 | 0.555 | 0.353 |
| delta_Rv3717 | 0.154 | 0.478 |
| delta_Rv3811 | 0.046 | 0.214 |
| delta_Rv0954 | -0.194 | 0.178 |
| PonA1 | 0.669 | 0.93 |
| EccD1_KO | -1.286 | 0.645 |
| EspI_KO | -1.469 | 0.274 |
| PE35_KO | 0.767 | -0.265 |
| PPE68_KO | -0.176 | 0.406 |
| glycerol2 | 0.0 | -0.43 |
| lignocerate | 0.0 | 0.425 |
| oleate | 0.0 | 1.392 |
| phosphatidylcholine | 0.0 | -0.255 |
| acetate | 0.229 | -0.451 |
| glucAc | 1.034 | -0.519 |
| Rv0950ko | 0.112 | 0.184 |
| Rv1096ko | 0.0 | 1.598 |
| Rv3684ko | -0.511 | 1.094 |
| delta_otsA_trehalose | -0.199 | -1.248 |