Top 10 genes with highest correlation to Rv2047c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0202c/mmpL11 | (cc=0.8379) | info on Rv0202c/mmpL11 |
| Rv1127c/ppdK | (cc=0.8318) | info on Rv1127c/ppdK |
| Rv2048c/pks12 | (cc=0.8168) | info on Rv2048c/pks12 |
| Rv0450c/mmpL4 | (cc=0.774) | info on Rv0450c/mmpL4 |
| Rv3495c/lprN | (cc=0.686) | info on Rv3495c/lprN |
| Rv3500c/yrbE4B | (cc=0.6855) | info on Rv3500c/yrbE4B |
| Rv3501c/yrbE4A | (cc=0.6795) | info on Rv3501c/yrbE4A |
| Rv2475c/- | (cc=0.6678) | info on Rv2475c/- |
| Rv2799/- | (cc=0.6518) | info on Rv2799/- |
| Rv1590/- | (cc=0.6426) | info on Rv1590/- |
Correlation of Rv2047c/- with Rv0202c/mmpL11
Normalized LFCs for Rv2047c/-:
(description and provenance of datasets)
| Rv2047c/- | Rv0202c/mmpL11 | |
| Fe_supp_jason_reseq | 1.124 | 1.55 |
| low_pH_jason_reseq | 1.372 | 1.104 |
| NO_jason_reseq | -4.082 | -3.639 |
| B6_jason_reseq | -1.144 | -1.212 |
| MHCII_jason_reseq | -1.52 | -0.797 |
| Isoniazid02 | -0.851 | 0.333 |
| Rifampicin4 | -0.945 | -0.915 |
| Ethambutol3 | -0.575 | 1.156 |
| Meropenem3 | -0.056 | 0.328 |
| Vancomycin16 | 1.754 | 2.709 |
| Rv2680_day32 | -2.847 | -1.836 |
| H37Rv_KO_MarP | 0.179 | -0.086 |
| hypoxia_3wks | -0.973 | -0.494 |
| hypoxia_6wks | -1.894 | -0.455 |
| glycerol | -2.674 | -1.701 |
| cholesterol | -2.967 | -2.481 |
| AJ | -3.072 | -2.294 |
| Bibs02 | -0.958 | -0.323 |
| Bibs02c | -1.675 | -0.784 |
| BL6 | -0.817 | -0.468 |
| BL6a | -2.246 | -1.19 |
| BXD01 | -1.795 | -0.984 |
| BXD010 | -2.081 | -0.498 |
| BXD011 | -1.903 | -1.073 |
| BXD03 | -2.106 | -1.05 |
| BXD04 | -1.298 | -1.129 |
| BXD05 | -1.93 | -0.626 |
| BXD06 | -1.839 | -0.85 |
| BXD07 | -1.762 | -1.105 |
| BXD08 | -1.908 | -1.28 |
| BXD09 | -1.936 | -1.062 |
| CAST | -2.327 | -1.94 |
| CCcont | -0.114 | 1.028 |
| DS01 | -2.577 | -2.335 |
| DS02 | -2.88 | -2.327 |
| DS04 | -1.113 | -1.31 |
| DS0c | -3.111 | -0.574 |
| GP01 | 0.043 | 0.979 |
| GP02 | -0.943 | 0.235 |
| GP0c | -0.12 | 0.173 |
| NOD | -2.974 | -1.23 |
| NZO | -1.796 | -1.425 |
| PWK | -2.401 | -1.401 |
| H37Rv_KO_CtpC | -0.812 | -0.472 |
| H37Rv_KO_CtpD | -1.436 | -0.403 |
| H37Rv_KO_Rv1272 | -0.705 | 0.014 |
| H37Rv_KO_SugABC | -1.421 | -0.835 |
| H37Rv_KO_MbtN | 1.275 | 0.467 |
| Trans05 | -0.207 | -0.398 |
| macrophage_unactivated | -2.241 | -1.938 |
| IL1 | 2.091 | 2.225 |
| Rapamycin | 1.685 | 1.504 |
| Tcell | -0.857 | -0.166 |
| GMCSF | -3.599 | -2.799 |
| IFNab | -0.892 | -0.68 |
| IFNg | -1.783 | -0.845 |
| IFNg_GMCSF1 | -1.838 | -1.621 |
| Rv1432_day32 | -2.265 | -1.996 |
| Rv1565c_day32 | -1.783 | -2.154 |
| secA2_input | 0.102 | -0.463 |
| delta_Rv3594 | 0.555 | 0.356 |
| delta_Rv3717 | 0.154 | 0.432 |
| delta_Rv3811 | 0.046 | 0.241 |
| delta_Rv0954 | -0.194 | -0.402 |
| PonA1 | 0.669 | 0.53 |
| EccD1_KO | -1.286 | -1.181 |
| EspI_KO | -1.469 | -1.7 |
| PE35_KO | 0.767 | -0.805 |
| PPE68_KO | -0.176 | -1.12 |
| glycerol2 | 0.0 | -1.477 |
| lignocerate | 0.0 | -0.919 |
| oleate | 0.0 | 0.074 |
| phosphatidylcholine | 0.0 | -1.057 |
| acetate | 0.229 | 0.943 |
| glucAc | 1.034 | 0.106 |
| Rv0950ko | 0.112 | 0.202 |
| Rv1096ko | 0.0 | -0.106 |
| Rv3684ko | -0.511 | 0.219 |
| delta_otsA_trehalose | -0.199 | 0.223 |