Top 10 genes with highest correlation to Rv2035/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2114/- | (cc=0.4831) | info on Rv2114/- |
| Rv0813c/- | (cc=0.4389) | info on Rv0813c/- |
| Rv1736c/narX | (cc=0.4382) | info on Rv1736c/narX |
| Rv2064/cobG | (cc=0.409) | info on Rv2064/cobG |
| Rv1253/deaD | (cc=0.4071) | info on Rv1253/deaD |
| Rv3132c/devS | (cc=0.4029) | info on Rv3132c/devS |
| Rv1165/typA | (cc=0.3997) | info on Rv1165/typA |
| Rv2831/echA16 | (cc=0.3907) | info on Rv2831/echA16 |
| Rv3226c/- | (cc=0.3875) | info on Rv3226c/- |
| Rv0377/- | (cc=0.3874) | info on Rv0377/- |
Correlation of Rv2035/- with Rv2114/-
Normalized LFCs for Rv2035/-:
(description and provenance of datasets)
| Rv2035/- | Rv2114/- | |
| Fe_supp_jason_reseq | -0.204 | -0.166 |
| low_pH_jason_reseq | 0.261 | -0.244 |
| NO_jason_reseq | 0.108 | -0.347 |
| B6_jason_reseq | -0.415 | 0.328 |
| MHCII_jason_reseq | 0.843 | 1.082 |
| Isoniazid02 | 0.224 | 0.355 |
| Rifampicin4 | 0.184 | 0.498 |
| Ethambutol3 | 0.924 | 0.824 |
| Meropenem3 | 0.407 | -0.317 |
| Vancomycin16 | 0.18 | 0.045 |
| Rv2680_day32 | -0.121 | -0.412 |
| H37Rv_KO_MarP | -0.113 | 0.841 |
| hypoxia_3wks | -1.124 | -0.957 |
| hypoxia_6wks | -0.472 | -0.37 |
| glycerol | 0.492 | 0.455 |
| cholesterol | 0.463 | 0.313 |
| AJ | 0.185 | -0.064 |
| Bibs02 | -0.313 | 0.261 |
| Bibs02c | 0.44 | 1.126 |
| BL6 | -0.214 | -0.568 |
| BL6a | 0.016 | 0.176 |
| BXD01 | -0.706 | -0.835 |
| BXD010 | -0.283 | 0.06 |
| BXD011 | -0.065 | 0.419 |
| BXD03 | 0.695 | 0.098 |
| BXD04 | 0.117 | -0.528 |
| BXD05 | 0.642 | -0.008 |
| BXD06 | -0.022 | -0.511 |
| BXD07 | -0.119 | -0.263 |
| BXD08 | -0.363 | -0.654 |
| BXD09 | -0.023 | -0.393 |
| CAST | -0.919 | -0.164 |
| CCcont | -0.424 | -0.263 |
| DS01 | 0.782 | 1.013 |
| DS02 | -0.227 | 0.701 |
| DS04 | 0.62 | 1.204 |
| DS0c | 0.955 | 0.751 |
| GP01 | 0.22 | 0.733 |
| GP02 | 0.436 | -0.77 |
| GP0c | -0.442 | -0.737 |
| NOD | -0.843 | 0.242 |
| NZO | -0.4 | 0.036 |
| PWK | 0.244 | 0.058 |
| H37Rv_KO_CtpC | -0.068 | -0.657 |
| H37Rv_KO_CtpD | -0.537 | 0.194 |
| H37Rv_KO_Rv1272 | 0.628 | 0.568 |
| H37Rv_KO_SugABC | -0.565 | 0.403 |
| H37Rv_KO_MbtN | 0.05 | 0.103 |
| Trans05 | -0.198 | 0.583 |
| macrophage_unactivated | -0.862 | -0.366 |
| IL1 | 0.439 | 0.347 |
| Rapamycin | -0.365 | 0.512 |
| Tcell | -0.033 | -0.45 |
| GMCSF | -0.082 | 0.092 |
| IFNab | 0.0 | 0.45 |
| IFNg | 0.345 | -0.096 |
| IFNg_GMCSF1 | 0.553 | 0.173 |
| Rv1432_day32 | -0.345 | -0.357 |
| Rv1565c_day32 | 0.313 | 0.445 |
| secA2_input | 0.16 | -0.515 |
| delta_Rv3594 | 1.517 | 1.247 |
| delta_Rv3717 | 0.666 | 0.166 |
| delta_Rv3811 | 0.918 | 0.515 |
| delta_Rv0954 | 0.609 | 1.269 |
| PonA1 | 0.127 | 0.464 |
| EccD1_KO | -0.362 | 0.395 |
| EspI_KO | 0.131 | -0.282 |
| PE35_KO | 0.134 | 0.041 |
| PPE68_KO | 0.291 | -0.333 |
| glycerol2 | -0.418 | -0.642 |
| lignocerate | -0.293 | -0.365 |
| oleate | -0.396 | -0.583 |
| phosphatidylcholine | -0.261 | -0.333 |
| acetate | 0.455 | 0.185 |
| glucAc | 0.213 | 1.76 |
| Rv0950ko | -0.669 | 0.22 |
| Rv1096ko | 0.516 | -0.377 |
| Rv3684ko | 0.118 | -0.373 |
| delta_otsA_trehalose | 0.7 | -0.126 |