Top 10 genes with highest correlation to Rv2015c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1765c/- | (cc=0.8602) | info on Rv1765c/- |
| Rv2741/PE_PGRS47 | (cc=0.6075) | info on Rv2741/PE_PGRS47 |
| Rv1089/PE10 | (cc=0.5744) | info on Rv1089/PE10 |
| Rv1737c/narK2 | (cc=0.5687) | info on Rv1737c/narK2 |
| Rv2340c/PE_PGRS39 | (cc=0.5605) | info on Rv2340c/PE_PGRS39 |
| Rv1625c/cya | (cc=0.5543) | info on Rv1625c/cya |
| Rv1840c/PE_PGRS34 | (cc=0.553) | info on Rv1840c/PE_PGRS34 |
| Rv0356c/- | (cc=0.5519) | info on Rv0356c/- |
| Rv3325/- | (cc=0.5497) | info on Rv3325/- |
| Rv1182/papA3 | (cc=0.5441) | info on Rv1182/papA3 |
Correlation of Rv2015c/- with Rv2340c/PE_PGRS39
Normalized LFCs for Rv2015c/-:
(description and provenance of datasets)
| Rv2015c/- | Rv2340c/PE_PGRS39 | |
| Fe_supp_jason_reseq | 0.18 | -0.063 |
| low_pH_jason_reseq | -0.142 | -0.452 |
| NO_jason_reseq | -0.486 | -0.417 |
| B6_jason_reseq | 0.448 | 0.657 |
| MHCII_jason_reseq | 0.237 | 0.619 |
| Isoniazid02 | 0.218 | 1.157 |
| Rifampicin4 | 0.777 | 0.485 |
| Ethambutol3 | 0.717 | 1.549 |
| Meropenem3 | 0.328 | 0.728 |
| Vancomycin16 | 0.021 | 0.061 |
| Rv2680_day32 | -0.264 | -0.465 |
| H37Rv_KO_MarP | -0.385 | -0.302 |
| hypoxia_3wks | -0.235 | -0.774 |
| hypoxia_6wks | -0.697 | -0.666 |
| glycerol | -0.278 | 0.65 |
| cholesterol | -0.516 | 0.315 |
| AJ | 0.598 | 0.565 |
| Bibs02 | 0.742 | 0.984 |
| Bibs02c | 0.579 | 0.679 |
| BL6 | -1.128 | -0.16 |
| BL6a | -0.423 | 0.014 |
| BXD01 | -0.68 | -0.58 |
| BXD010 | -0.026 | -0.687 |
| BXD011 | -0.594 | -0.737 |
| BXD03 | -0.133 | -0.566 |
| BXD04 | -0.177 | 0.035 |
| BXD05 | -0.577 | -0.068 |
| BXD06 | -0.834 | -0.939 |
| BXD07 | -1.08 | -0.624 |
| BXD08 | -0.957 | -0.277 |
| BXD09 | -0.406 | -0.626 |
| CAST | 0.389 | 0.794 |
| CCcont | -0.744 | -0.278 |
| DS01 | -0.024 | 0.956 |
| DS02 | -0.203 | 0.993 |
| DS04 | 0.048 | 0.45 |
| DS0c | 0.456 | 0.94 |
| GP01 | 0.632 | -0.24 |
| GP02 | 0.362 | 0.643 |
| GP0c | 0.536 | -0.111 |
| NOD | 0.472 | -0.218 |
| NZO | 0.705 | 0.48 |
| PWK | 1.238 | 0.672 |
| H37Rv_KO_CtpC | -0.074 | -0.891 |
| H37Rv_KO_CtpD | 0.704 | -0.009 |
| H37Rv_KO_Rv1272 | -0.124 | 0.232 |
| H37Rv_KO_SugABC | -0.763 | 0.386 |
| H37Rv_KO_MbtN | 0.258 | 0.239 |
| Trans05 | 0.088 | 0.28 |
| macrophage_unactivated | -1.228 | -1.004 |
| IL1 | -0.136 | -0.736 |
| Rapamycin | -0.678 | -0.62 |
| Tcell | -0.551 | -0.978 |
| GMCSF | 0.0 | -0.747 |
| IFNab | -0.998 | -0.429 |
| IFNg | -0.77 | -0.526 |
| IFNg_GMCSF1 | -0.072 | -0.154 |
| Rv1432_day32 | 0.173 | 0.352 |
| Rv1565c_day32 | 0.185 | 0.051 |
| secA2_input | 0.604 | 0.512 |
| delta_Rv3594 | -0.04 | -0.207 |
| delta_Rv3717 | 0.394 | -0.44 |
| delta_Rv3811 | 0.274 | -0.007 |
| delta_Rv0954 | 0.022 | 0.172 |
| PonA1 | -0.155 | -0.128 |
| EccD1_KO | 0.691 | 0.697 |
| EspI_KO | -0.083 | 0.211 |
| PE35_KO | 0.729 | 0.117 |
| PPE68_KO | 0.672 | 0.038 |
| glycerol2 | -0.304 | -0.041 |
| lignocerate | 0.093 | 0.516 |
| oleate | -0.147 | 0.0 |
| phosphatidylcholine | 0.046 | 0.494 |
| acetate | 0.196 | 0.116 |
| glucAc | 0.164 | 0.086 |
| Rv0950ko | -0.449 | 0.555 |
| Rv1096ko | 0.0 | -0.537 |
| Rv3684ko | -0.753 | -0.442 |
| delta_otsA_trehalose | 0.418 | -0.722 |