Top 10 genes with highest correlation to Rv1985c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3382c/lytB1 | (cc=0.4515) | info on Rv3382c/lytB1 |
| Rv1980c/mpt64 | (cc=0.4358) | info on Rv1980c/mpt64 |
| Rv1191/- | (cc=0.4336) | info on Rv1191/- |
| Rv0114/gmhB | (cc=0.4313) | info on Rv0114/gmhB |
| Rv1790/PPE27 | (cc=0.4289) | info on Rv1790/PPE27 |
| Rv3826/fadD23 | (cc=0.4225) | info on Rv3826/fadD23 |
| Rv3430c/- | (cc=0.4213) | info on Rv3430c/- |
| Rv1816/- | (cc=0.4175) | info on Rv1816/- |
| Rv0149/- | (cc=0.4062) | info on Rv0149/- |
| Rv3857c/- | (cc=0.3998) | info on Rv3857c/- |
Correlation of Rv1985c/- with Rv1790/PPE27
Normalized LFCs for Rv1985c/-:
(description and provenance of datasets)
| Rv1985c/- | Rv1790/PPE27 | |
| Fe_supp_jason_reseq | -0.137 | -0.36 |
| low_pH_jason_reseq | -0.944 | -1.364 |
| NO_jason_reseq | 0.11 | 0.664 |
| B6_jason_reseq | -0.292 | -1.212 |
| MHCII_jason_reseq | 0.107 | -1.733 |
| Isoniazid02 | 0.391 | -0.148 |
| Rifampicin4 | 0.336 | 0.349 |
| Ethambutol3 | 0.454 | 0.238 |
| Meropenem3 | 1.809 | 1.151 |
| Vancomycin16 | 0.08 | -0.586 |
| Rv2680_day32 | -0.109 | 0.027 |
| H37Rv_KO_MarP | 0.041 | 0.01 |
| hypoxia_3wks | -0.231 | 0.319 |
| hypoxia_6wks | 0.117 | -0.209 |
| glycerol | 0.023 | -0.983 |
| cholesterol | -0.959 | -1.986 |
| AJ | -0.287 | 0.118 |
| Bibs02 | 0.513 | -0.514 |
| Bibs02c | -0.415 | -1.102 |
| BL6 | 0.316 | -0.609 |
| BL6a | -0.095 | -0.881 |
| BXD01 | -0.161 | -0.438 |
| BXD010 | 0.101 | -0.57 |
| BXD011 | 0.885 | -0.458 |
| BXD03 | 0.199 | -0.157 |
| BXD04 | -0.219 | -0.441 |
| BXD05 | 0.106 | 0.143 |
| BXD06 | -0.097 | -0.764 |
| BXD07 | 0.524 | -0.029 |
| BXD08 | -0.728 | -0.338 |
| BXD09 | 0.269 | -0.534 |
| CAST | -0.425 | -0.444 |
| CCcont | -0.244 | -0.515 |
| DS01 | -0.537 | -1.343 |
| DS02 | -1.085 | -1.081 |
| DS04 | -1.2 | -0.398 |
| DS0c | -0.984 | -1.226 |
| GP01 | -0.475 | 0.544 |
| GP02 | -0.05 | 1.099 |
| GP0c | -0.625 | 0.016 |
| NOD | 0.272 | -0.687 |
| NZO | -0.588 | -0.501 |
| PWK | 0.078 | -0.004 |
| H37Rv_KO_CtpC | 0.334 | -0.031 |
| H37Rv_KO_CtpD | 0.903 | 0.061 |
| H37Rv_KO_Rv1272 | 0.632 | 0.189 |
| H37Rv_KO_SugABC | -0.331 | -0.115 |
| H37Rv_KO_MbtN | 1.092 | 0.455 |
| Trans05 | 0.86 | 0.611 |
| macrophage_unactivated | 0.47 | 0.145 |
| IL1 | -0.208 | 0.32 |
| Rapamycin | 0.402 | -0.288 |
| Tcell | -0.323 | 0.863 |
| GMCSF | -0.074 | 1.135 |
| IFNab | -0.345 | -0.65 |
| IFNg | 0.804 | 0.82 |
| IFNg_GMCSF1 | -1.197 | 0.559 |
| Rv1432_day32 | 0.78 | 0.372 |
| Rv1565c_day32 | -1.652 | -1.579 |
| secA2_input | -0.996 | 0.246 |
| delta_Rv3594 | -0.598 | -0.298 |
| delta_Rv3717 | -0.56 | -0.526 |
| delta_Rv3811 | -0.854 | -0.251 |
| delta_Rv0954 | -0.133 | -0.607 |
| PonA1 | -0.646 | -0.526 |
| EccD1_KO | 0.02 | 0.257 |
| EspI_KO | -0.488 | 0.117 |
| PE35_KO | 0.0 | 0.251 |
| PPE68_KO | -0.141 | 0.058 |
| glycerol2 | -0.021 | 0.398 |
| lignocerate | -0.462 | -0.119 |
| oleate | 0.329 | 0.431 |
| phosphatidylcholine | -0.031 | 0.601 |
| acetate | -0.153 | 0.076 |
| glucAc | -0.827 | 0.225 |
| Rv0950ko | 0.519 | 0.507 |
| Rv1096ko | 0.181 | -0.621 |
| Rv3684ko | 0.088 | -0.377 |
| delta_otsA_trehalose | 0.259 | 0.056 |