Top 10 genes with highest correlation to Rv1985c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3382c/lytB1 | (cc=0.4515) | info on Rv3382c/lytB1 |
| Rv1980c/mpt64 | (cc=0.4358) | info on Rv1980c/mpt64 |
| Rv1191/- | (cc=0.4336) | info on Rv1191/- |
| Rv0114/gmhB | (cc=0.4313) | info on Rv0114/gmhB |
| Rv1790/PPE27 | (cc=0.4289) | info on Rv1790/PPE27 |
| Rv3826/fadD23 | (cc=0.4225) | info on Rv3826/fadD23 |
| Rv3430c/- | (cc=0.4213) | info on Rv3430c/- |
| Rv1816/- | (cc=0.4175) | info on Rv1816/- |
| Rv0149/- | (cc=0.4062) | info on Rv0149/- |
| Rv3857c/- | (cc=0.3998) | info on Rv3857c/- |
Correlation of Rv1985c/- with Rv3382c/lytB1
Normalized LFCs for Rv1985c/-:
(description and provenance of datasets)
| Rv1985c/- | Rv3382c/lytB1 | |
| Fe_supp_jason_reseq | -0.137 | -0.537 |
| low_pH_jason_reseq | -0.944 | -0.453 |
| NO_jason_reseq | 0.11 | -0.129 |
| B6_jason_reseq | -0.292 | -0.782 |
| MHCII_jason_reseq | 0.107 | -0.265 |
| Isoniazid02 | 0.391 | 0.4 |
| Rifampicin4 | 0.336 | -0.027 |
| Ethambutol3 | 0.454 | 0.499 |
| Meropenem3 | 1.809 | 1.751 |
| Vancomycin16 | 0.08 | 0.501 |
| Rv2680_day32 | -0.109 | -2.159 |
| H37Rv_KO_MarP | 0.041 | -0.384 |
| hypoxia_3wks | -0.231 | 0.128 |
| hypoxia_6wks | 0.117 | -0.47 |
| glycerol | 0.023 | 0.531 |
| cholesterol | -0.959 | 0.472 |
| AJ | -0.287 | 0.126 |
| Bibs02 | 0.513 | 1.02 |
| Bibs02c | -0.415 | 1.322 |
| BL6 | 0.316 | 0.745 |
| BL6a | -0.095 | 1.578 |
| BXD01 | -0.161 | 0.16 |
| BXD010 | 0.101 | 0.693 |
| BXD011 | 0.885 | 1.176 |
| BXD03 | 0.199 | 1.089 |
| BXD04 | -0.219 | 0.461 |
| BXD05 | 0.106 | 1.409 |
| BXD06 | -0.097 | 0.929 |
| BXD07 | 0.524 | 0.809 |
| BXD08 | -0.728 | 0.705 |
| BXD09 | 0.269 | 0.93 |
| CAST | -0.425 | 0.719 |
| CCcont | -0.244 | 0.315 |
| DS01 | -0.537 | 0.291 |
| DS02 | -1.085 | 0.507 |
| DS04 | -1.2 | -0.271 |
| DS0c | -0.984 | 0.707 |
| GP01 | -0.475 | -0.347 |
| GP02 | -0.05 | 0.885 |
| GP0c | -0.625 | -0.012 |
| NOD | 0.272 | 1.061 |
| NZO | -0.588 | 0.0 |
| PWK | 0.078 | 0.159 |
| H37Rv_KO_CtpC | 0.334 | 0.595 |
| H37Rv_KO_CtpD | 0.903 | 2.104 |
| H37Rv_KO_Rv1272 | 0.632 | 0.912 |
| H37Rv_KO_SugABC | -0.331 | 0.798 |
| H37Rv_KO_MbtN | 1.092 | 1.1 |
| Trans05 | 0.86 | 1.041 |
| macrophage_unactivated | 0.47 | 0.17 |
| IL1 | -0.208 | 0.089 |
| Rapamycin | 0.402 | 0.798 |
| Tcell | -0.323 | -0.244 |
| GMCSF | -0.074 | 0.422 |
| IFNab | -0.345 | 0.599 |
| IFNg | 0.804 | 0.893 |
| IFNg_GMCSF1 | -1.197 | -0.632 |
| Rv1432_day32 | 0.78 | -0.155 |
| Rv1565c_day32 | -1.652 | 0.785 |
| secA2_input | -0.996 | -1.34 |
| delta_Rv3594 | -0.598 | -0.396 |
| delta_Rv3717 | -0.56 | -1.029 |
| delta_Rv3811 | -0.854 | -0.442 |
| delta_Rv0954 | -0.133 | -0.384 |
| PonA1 | -0.646 | -0.81 |
| EccD1_KO | 0.02 | -1.033 |
| EspI_KO | -0.488 | -0.394 |
| PE35_KO | 0.0 | -0.324 |
| PPE68_KO | -0.141 | -0.646 |
| glycerol2 | -0.021 | -0.671 |
| lignocerate | -0.462 | -0.872 |
| oleate | 0.329 | 0.699 |
| phosphatidylcholine | -0.031 | -0.581 |
| acetate | -0.153 | -0.04 |
| glucAc | -0.827 | -1.299 |
| Rv0950ko | 0.519 | 0.54 |
| Rv1096ko | 0.181 | -0.042 |
| Rv3684ko | 0.088 | -0.285 |
| delta_otsA_trehalose | 0.259 | 0.068 |