Top 10 genes with highest correlation to Rv1974/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3354/- | (cc=0.7478) | info on Rv3354/- |
| Rv2499c/- | (cc=0.7416) | info on Rv2499c/- |
| Rv0850/- | (cc=0.723) | info on Rv0850/- |
| Rv2028c/- | (cc=0.7181) | info on Rv2028c/- |
| Rv0089/- | (cc=0.7172) | info on Rv0089/- |
| Rv2633c/- | (cc=0.692) | info on Rv2633c/- |
| Rv3295/- | (cc=0.678) | info on Rv3295/- |
| Rv0887c/- | (cc=0.6699) | info on Rv0887c/- |
| Rv1323/fadA4 | (cc=0.6612) | info on Rv1323/fadA4 |
| Rv1192/- | (cc=0.657) | info on Rv1192/- |
Correlation of Rv1974/- with Rv3354/-
Normalized LFCs for Rv1974/-:
(description and provenance of datasets)
| Rv1974/- | Rv3354/- | |
| Fe_supp_jason_reseq | 0.633 | -1.138 |
| low_pH_jason_reseq | 0.015 | -0.381 |
| NO_jason_reseq | -0.559 | -0.793 |
| B6_jason_reseq | 1.201 | 0.985 |
| MHCII_jason_reseq | 1.739 | 1.019 |
| Isoniazid02 | 0.106 | 1.043 |
| Rifampicin4 | -0.829 | 0.125 |
| Ethambutol3 | -0.062 | 0.398 |
| Meropenem3 | 1.264 | 1.179 |
| Vancomycin16 | 0.066 | 0.162 |
| Rv2680_day32 | 1.367 | 0.659 |
| H37Rv_KO_MarP | -0.95 | 0.422 |
| hypoxia_3wks | -0.801 | -0.347 |
| hypoxia_6wks | -0.319 | -0.595 |
| glycerol | -0.471 | 0.674 |
| cholesterol | -0.672 | 0.892 |
| AJ | -0.346 | -0.171 |
| Bibs02 | 0.268 | -0.029 |
| Bibs02c | 0.311 | 0.596 |
| BL6 | -1.414 | -0.912 |
| BL6a | -0.199 | -0.067 |
| BXD01 | -1.518 | -1.687 |
| BXD010 | -2.27 | -1.434 |
| BXD011 | -1.543 | -2.812 |
| BXD03 | -1.714 | -2.487 |
| BXD04 | -2.232 | -1.729 |
| BXD05 | -0.87 | -1.146 |
| BXD06 | -1.465 | -1.932 |
| BXD07 | -1.398 | -2.262 |
| BXD08 | -1.622 | -1.667 |
| BXD09 | -1.346 | -2.542 |
| CAST | 0.085 | 0.097 |
| CCcont | -1.236 | -1.82 |
| DS01 | 0.241 | -0.077 |
| DS02 | 0.117 | 0.269 |
| DS04 | -0.141 | 0.395 |
| DS0c | 0.006 | -0.597 |
| GP01 | 0.371 | -1.486 |
| GP02 | -0.885 | -0.295 |
| GP0c | -1.154 | -0.754 |
| NOD | -0.163 | -0.169 |
| NZO | 0.162 | 0.127 |
| PWK | -0.274 | 0.367 |
| H37Rv_KO_CtpC | -1.474 | -0.788 |
| H37Rv_KO_CtpD | -1.606 | -1.146 |
| H37Rv_KO_Rv1272 | -1.434 | -0.927 |
| H37Rv_KO_SugABC | -0.667 | -0.855 |
| H37Rv_KO_MbtN | -2.367 | -1.624 |
| Trans05 | -1.444 | -0.244 |
| macrophage_unactivated | -1.162 | -1.654 |
| IL1 | -0.688 | -1.649 |
| Rapamycin | -1.409 | -1.034 |
| Tcell | -1.466 | -1.473 |
| GMCSF | -1.288 | -2.118 |
| IFNab | -0.98 | -2.056 |
| IFNg | -0.818 | -0.949 |
| IFNg_GMCSF1 | -0.962 | -0.641 |
| Rv1432_day32 | -1.304 | 0.3 |
| Rv1565c_day32 | 0.156 | 0.635 |
| secA2_input | 0.167 | 0.645 |
| delta_Rv3594 | 0.941 | -0.395 |
| delta_Rv3717 | 0.837 | -0.21 |
| delta_Rv3811 | 1.031 | 0.592 |
| delta_Rv0954 | 1.516 | 0.58 |
| PonA1 | 0.54 | -0.802 |
| EccD1_KO | 0.408 | 1.217 |
| EspI_KO | 1.768 | 1.201 |
| PE35_KO | 1.053 | 0.204 |
| PPE68_KO | 0.464 | 1.254 |
| glycerol2 | 0.993 | 1.595 |
| lignocerate | 1.427 | 1.672 |
| oleate | -0.781 | 0.822 |
| phosphatidylcholine | 1.108 | 1.291 |
| acetate | 0.828 | 1.047 |
| glucAc | 1.372 | 1.449 |
| Rv0950ko | -0.22 | 0.365 |
| Rv1096ko | -0.383 | 0.268 |
| Rv3684ko | 1.349 | 0.933 |
| delta_otsA_trehalose | -0.124 | 0.808 |