Top 10 genes with highest correlation to Rv1954A/-:
update plot | correlation | link to info on gene |
---|---|---|
Rv1954c/- | (cc=0.6871) | info on Rv1954c/- |
Rv2040c/- | (cc=0.5504) | info on Rv2040c/- |
Rv2562/- | (cc=0.5253) | info on Rv2562/- |
Rv3166c/- | (cc=0.5018) | info on Rv3166c/- |
Rv1088/PE9 | (cc=0.4774) | info on Rv1088/PE9 |
Rv1580c/- | (cc=0.4723) | info on Rv1580c/- |
Rv1561/vapC11 | (cc=0.4606) | info on Rv1561/vapC11 |
Rv1508A/- | (cc=0.4324) | info on Rv1508A/- |
Rv1583c/- | (cc=0.4282) | info on Rv1583c/- |
Rv2481c/- | (cc=0.4281) | info on Rv2481c/- |
Correlation of Rv1954A/- with Rv1508A/-
Normalized LFCs for Rv1954A/-:
(description and provenance of datasets)
Rv1954A/- | Rv1508A/- | |
Fe_supp_jason_reseq | -0.051 | 0.608 |
low_pH_jason_reseq | -0.878 | 0.279 |
NO_jason_reseq | 0.795 | 0.116 |
B6_jason_reseq | -1.023 | -0.172 |
MHCII_jason_reseq | -0.98 | -0.921 |
Isoniazid02 | 0.162 | -0.662 |
Rifampicin4 | 0.699 | -0.36 |
Ethambutol3 | -0.047 | 1.415 |
Meropenem3 | 0.236 | -0.252 |
Vancomycin16 | 0.034 | -0.48 |
Rv2680_day32 | 0.267 | -0.352 |
H37Rv_KO_MarP | 0.679 | 0.509 |
hypoxia_3wks | -0.909 | -0.921 |
hypoxia_6wks | -1.04 | 0.489 |
glycerol | -1.412 | -0.974 |
cholesterol | -1.382 | -0.19 |
AJ | -0.906 | 0.36 |
Bibs02 | -0.631 | -1.407 |
Bibs02c | -0.423 | 0.243 |
BL6 | 1.662 | 0.497 |
BL6a | 0.082 | -0.07 |
BXD01 | -0.17 | 0.131 |
BXD010 | 0.235 | 0.31 |
BXD011 | 0.376 | -0.3 |
BXD03 | 1.021 | 0.418 |
BXD04 | 0.345 | 0.011 |
BXD05 | 1.009 | -0.331 |
BXD06 | 0.464 | 0.046 |
BXD07 | 0.734 | -0.223 |
BXD08 | 0.663 | -0.122 |
BXD09 | 0.683 | 0.185 |
CAST | -0.352 | 0.475 |
CCcont | -0.105 | -0.21 |
DS01 | -0.441 | 0.0 |
DS02 | -0.199 | -0.584 |
DS04 | 0.049 | -0.178 |
DS0c | -0.137 | -0.097 |
GP01 | -0.69 | 0.68 |
GP02 | 0.515 | 0.084 |
GP0c | -0.193 | 0.182 |
NOD | -0.351 | -0.02 |
NZO | -1.113 | -0.751 |
PWK | -0.756 | -0.217 |
H37Rv_KO_CtpC | -0.545 | 0.201 |
H37Rv_KO_CtpD | -0.004 | 1.846 |
H37Rv_KO_Rv1272 | 1.449 | 1.664 |
H37Rv_KO_SugABC | -2.115 | -1.846 |
H37Rv_KO_MbtN | -1.266 | -0.266 |
Trans05 | 0.628 | 0.788 |
macrophage_unactivated | -0.174 | 0.385 |
IL1 | -0.065 | -0.742 |
Rapamycin | 0.7 | 0.117 |
Tcell | 0.414 | 0.283 |
GMCSF | 0.121 | -0.069 |
IFNab | 0.78 | -0.363 |
IFNg | 0.123 | -0.548 |
IFNg_GMCSF1 | 1.084 | -0.204 |
Rv1432_day32 | 0.746 | 0.811 |
Rv1565c_day32 | -0.839 | -0.55 |
secA2_input | -1.506 | -0.612 |
delta_Rv3594 | 0.021 | -1.848 |
delta_Rv3717 | 0.461 | -1.063 |
delta_Rv3811 | -0.32 | -0.842 |
delta_Rv0954 | -0.605 | -1.008 |
PonA1 | -0.433 | -0.374 |
EccD1_KO | 0.135 | 0.118 |
EspI_KO | 0.713 | -0.519 |
PE35_KO | 0.12 | 1.038 |
PPE68_KO | 0.32 | 1.107 |
glycerol2 | -0.046 | -0.113 |
lignocerate | 0.557 | 0.138 |
oleate | -0.437 | -0.155 |
phosphatidylcholine | 0.246 | 0.322 |
acetate | 0.256 | 0.086 |
glucAc | 0.797 | 0.166 |
Rv0950ko | -0.326 | -0.163 |
Rv1096ko | -0.745 | -1.019 |
Rv3684ko | -1.896 | -0.684 |
delta_otsA_trehalose | -1.174 | -2.369 |